Gene
RNA
| Item | Value |
|---|---|
| gene id | G34510 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 32953623 ~ 32953861 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger homeobox protein 4 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU39059 | True | 239 | lncRNA | 0.41 | 1 | 32953623 | 32953861 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| grm3 | LOC106573453 | coding | downstream | 29024 | 32867631 ~ 32924599 (-) |
| LOC118964459 | NA | coding | downstream | 108891 | 32839445 ~ 32844732 (-) |
| LOC110521494 | LOC106573457 | coding | downstream | 169644 | 32761197 ~ 32783979 (-) |
| LOC110532201 | LOC106573459 | coding | downstream | 219174 | 32530266 ~ 32734449 (-) |
| LOC110521272 | LOC106597893 | coding | downstream | 452788 | 32485245 ~ 32500835 (-) |
| lrrc4.2 | LOC106573446 | coding | upstream | 770988 | 33724849 ~ 33729966 (-) |
| rbm28 | rbm28 | coding | upstream | 990973 | 33944834 ~ 33953935 (-) |
| LOC118966666 | LOC106573442 | coding | upstream | 1005467 | 33959328 ~ 33962096 (-) |
| LOC110521614 | LOC106573524 | coding | upstream | 1029516 | 33983377 ~ 34002282 (-) |
| si:ch1073-390k14.1 | LOC106573523 | coding | upstream | 1055419 | 34009280 ~ 34018443 (-) |
| G34484 | NA | non-coding | downstream | 50945 | 32902386 ~ 32902678 (-) |
| G34457 | NA | non-coding | downstream | 117508 | 32835246 ~ 32836115 (-) |
| G34458 | NA | non-coding | downstream | 118439 | 32834667 ~ 32835184 (-) |
| G34424 | NA | non-coding | downstream | 147497 | 32778661 ~ 32806126 (-) |
| G35052 | LOC106573452 | non-coding | upstream | 97438 | 33051299 ~ 33059262 (-) |
| G35177 | LOC106573451 | non-coding | upstream | 283303 | 33237164 ~ 33239834 (-) |
| G35272 | LOC106573449 | non-coding | upstream | 447324 | 33401185 ~ 33481308 (-) |
| G35375 | NA | non-coding | upstream | 599247 | 33553108 ~ 33553484 (-) |
| G35376 | NA | non-coding | upstream | 600179 | 33554040 ~ 33554344 (-) |
| G33386 | NA | other | downstream | 967473 | 31984771 ~ 31989249 (-) |
| LOC110521048 | LOC100194695 | other | downstream | 1508674 | 31426123 ~ 31444964 (-) |
| LOC110520932 | LOC106573529 | other | downstream | 1820732 | 31131151 ~ 31132900 (-) |
| G29906 | mef2a | other | downstream | 3672923 | 29280276 ~ 29280700 (-) |
| G29355 | NA | other | downstream | 4249267 | 28703887 ~ 28704356 (-) |
| G35075 | LOC106573452 | other | upstream | 153258 | 33107119 ~ 33108497 (-) |
| G35299 | NA | other | upstream | 488507 | 33442368 ~ 33452413 (-) |
| G35628 | NA | other | upstream | 913697 | 33867558 ~ 33868045 (-) |
| G36141 | NA | other | upstream | 1323839 | 34277700 ~ 34362736 (-) |
| G36196 | NA | other | upstream | 1387701 | 34341562 ~ 34381232 (-) |
