G35075 (LOC106573452)


Basic Information

Item Value
gene id G35075
gene name LOC106573452
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 33107119 ~ 33108497 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU39673
AAAAATATGATTCTATGTTCATTCTAGACATAATATGTGATTATCATAGTAGCAGTATAATATGTCCTATCTAAGCTGAACTAGAGCATGCAGTTTCTCCTGTACATGTTATAGAAGTATTTACAGTCATTCAACATGAATGCATCTGATTAAGACACAAAACACTGAGCTCTGGGCACGTCTCATTCGGCTAAAATGGAGTTATAGCTAGAAGGGATGCAGCTAATGTCAAGGCCATGTCACACTCTCACTGTGACCTTAGACTTTGAACAAACCTACCCCCACACCGAAAGCCAGCTTAGTTAGTTAATGCTTGCTAACTTGCAAGGGCGGTAGTTAAAATTGTCAAAAAAGTTGTTTGTAGCAAGTGTAGCCAATATCAGTTTGACAACTAAGGCAAAGTGATTGCAGTGATGTTCCCCCATGTACTACGATCAAAACATAATGATTCTAAACACTCTCCAAAGTCCCAAATTCAAGTTCTAAACTTTCTCTGGAATTTAAAATAACTTTTGACATTGGCTGCAGCCCCTCTTAAACAAGGTTACTTTGATACGTCAGTAAAGGCACTGAGACACTATTGAGACACAGCCATAGGGATCATGGGTAGTGTAGTTTGAGAAGCCAGGCCTACATGAGCCCTATGAGTGTTTGACTGGTATGAAAGAAGATTATACCTCTGTAAGAAGAGTCTATCGTGGTCCATACTATCAACTGCAGGATCCCAGTTCCCATGTCGTTATAACTGTCCCTCAACTAAACATGATCATCTTCCCTATTGTCCCCTCTTACACCTATAAACATTGATGGTCTCCCCTAATATTTTGACTGATTACACTTTTGGCTACTGCTGTTTCAGTAGCAACTCCTCCTCTTTGTTACCCTCACCACTTCATCCACTCCTCCACTGCCCTACCCTCTCGCCATccttctctttatccctctctgcACCCCTCTCTCCATGGTGTCGTCTGTTCCTGCTCTTCTTCAACTCCTGGATGTGTTTCCATTTTCCTGCTCCttgccctctcccccctctcctattGGCCGGCCTCTTTTCCAGCCACAGCGAATCACAGTAGTCCTCCAGCGAGCCAATGGGAGAACTCATCACACGCAGATAATCCTTATAGCGCTGACGAGACTCAGCCCCGGGGCGAACTTCGACGCTGGGGTCCTCGCTGGGCTTGGTCCGCCCATCCAGATGCCCGTAGGGAATGAGACGAAGTGTAAGGCGGAGCAAAGTGTGTGTGAAGTGAGTGTGTTCCtgtgccacacacacatacacgccagCGTCGGCAGGATGGAGAGAGCGGATGAGAAAACCACGGTCTGTAAGGACCACTCTGTCATCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39673 True 1355 TUCP 0.51 2 33107119 33108497

Neighbor

gene id symbol gene type direction distance location
grm3 LOC106573453 coding downstream 182520 32867631 ~ 32924599 (-)
LOC118964459 NA coding downstream 262387 32839445 ~ 32844732 (-)
LOC110521494 LOC106573457 coding downstream 323140 32761197 ~ 32783979 (-)
LOC110532201 LOC106573459 coding downstream 372670 32530266 ~ 32734449 (-)
LOC110521272 LOC106597893 coding downstream 606284 32485245 ~ 32500835 (-)
lrrc4.2 LOC106573446 coding upstream 616352 33724849 ~ 33729966 (-)
rbm28 rbm28 coding upstream 836337 33944834 ~ 33953935 (-)
LOC118966666 LOC106573442 coding upstream 850831 33959328 ~ 33962096 (-)
LOC110521614 LOC106573524 coding upstream 874880 33983377 ~ 34002282 (-)
si:ch1073-390k14.1 LOC106573523 coding upstream 900783 34009280 ~ 34018443 (-)
G35052 LOC106573452 non-coding downstream 47857 33051299 ~ 33059262 (-)
G34510 NA non-coding downstream 153258 32953623 ~ 32953861 (-)
G34484 NA non-coding downstream 204441 32902386 ~ 32902678 (-)
G34457 NA non-coding downstream 271004 32835246 ~ 32836115 (-)
G35177 LOC106573451 non-coding upstream 128667 33237164 ~ 33239834 (-)
G35272 LOC106573449 non-coding upstream 292688 33401185 ~ 33481308 (-)
G35375 NA non-coding upstream 444611 33553108 ~ 33553484 (-)
G35376 NA non-coding upstream 445543 33554040 ~ 33554344 (-)
G35382 NA non-coding upstream 454460 33562957 ~ 33563204 (-)
G33386 NA other downstream 1120969 31984771 ~ 31989249 (-)
LOC110521048 LOC100194695 other downstream 1662170 31426123 ~ 31444964 (-)
LOC110520932 LOC106573529 other downstream 1974228 31131151 ~ 31132900 (-)
G29906 mef2a other downstream 3826419 29280276 ~ 29280700 (-)
G29355 NA other downstream 4402763 28703887 ~ 28704356 (-)
G35299 NA other upstream 333871 33442368 ~ 33452413 (-)
G35628 NA other upstream 759061 33867558 ~ 33868045 (-)
G36141 NA other upstream 1169203 34277700 ~ 34362736 (-)
G36196 NA other upstream 1233065 34341562 ~ 34381232 (-)
G37310 LOC106573403 other upstream 2165212 35273709 ~ 35278005 (-)

Expression


Co-expression Network