G34877


Basic Information

Item Value
gene id G34877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 33554223 ~ 33554469 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU39451
acacatacttacactgactccccaacacacatatacacacacccacacactacatacgcccACACACCCTTACATCATGCATATGcatacagacaccacacacacacacacacaatacatacagtgcatttggaaagtattcagaccacttaactttttccacattttgttacattacagccttattctaaaactgataaTTGTTGTTTTAactcatcaatctacccacaatagcccataatgacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39451 True 247 lncRNA 0.43 1 33554223 33554469

Neighbor

gene id symbol gene type direction distance location
LOC110521560 LOC106573448 coding upstream 32555 33498661 ~ 33521668 (+)
LOC110532225 LOC106573449 coding upstream 72859 33421518 ~ 33481364 (+)
LOC118964465 LOC106573449 coding upstream 151447 33371468 ~ 33402776 (+)
sema3e LOC106573450 coding upstream 227700 33268524 ~ 33326523 (+)
LOC110521527 LOC106573451 coding upstream 308458 33216358 ~ 33245765 (+)
LOC110521571 LOC106573447 coding downstream 68400 33622869 ~ 33649767 (+)
LOC110521608 LOC106573441 coding downstream 413281 33967750 ~ 33977868 (+)
LOC110521627 LOC106573440 coding downstream 449711 34004180 ~ 34006028 (+)
LOC110521655 LOC106573426 coding downstream 491778 34046247 ~ 34057828 (+)
calub LOC106573432 coding downstream 509902 34064371 ~ 34068111 (+)
G34825 NA non-coding upstream 71012 33482893 ~ 33483211 (+)
sema3d LOC106573452 non-coding upstream 466545 33037111 ~ 33108578 (+)
G33964 NA non-coding upstream 599759 32954242 ~ 32954464 (+)
G33961 NA non-coding upstream 603934 32950072 ~ 32950289 (+)
G34879 NA non-coding downstream 5730 33560199 ~ 33560418 (+)
G35631 NA non-coding downstream 317742 33872211 ~ 33872428 (+)
G35691 NA non-coding downstream 386631 33941100 ~ 33941325 (+)
G35692 NA non-coding downstream 387058 33941527 ~ 33941831 (+)
G35694 NA non-coding downstream 388942 33943411 ~ 33943650 (+)
G33768 NA other upstream 936539 32613073 ~ 32617684 (+)
G33681 LOC106573476 other upstream 1101838 32450854 ~ 32452385 (+)
G33284 NA other upstream 1592676 31956530 ~ 31961547 (+)
G34963 NA other downstream 147308 33701777 ~ 33703462 (+)
G35699 NA other downstream 403628 33958097 ~ 33958681 (+)
G35700 NA other downstream 405591 33960060 ~ 33960447 (+)
LOC110521835 LOC106573423 other downstream 935651 34490120 ~ 34507419 (+)
LOC110521947 LOC106573413 other downstream 1209702 34763838 ~ 34808250 (+)

Expression


Co-expression Network