G36055


Basic Information

Item Value
gene id G36055
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 34137755 ~ 34139621 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU40758
CAATAATTACACACTACCAGGCcagagaaacacaaacacacatcagcACTGAACACACTGAGTcagcaggggagtgtgtgtgtggaggaggatgGAAAGTTTTTCATTCATGCAAAAAAACACCAACCAGTCAGACACTGTTGAGTATTTTATTGTTCTATTCTGAGTGGTAACATCTGTGTGATGGCAACAGCACATACTGTATGATTACTGGCACAATGCTTCACAATAAACAACACAGCAGATACTGTATGATTACTGGCACAATGCTTCACAATAAACAACACAGCACATACTATATGATTACTGGCACAATGCTTCATAATAAACAACACAGCACATACTGTATGATTACTGGCACAATGCTTCACAATAAACAACACAGCAGATACTGTATGATTACTGGCACAATGCTTCACAATAAACAACACAGCAGATACTGTATGATTACTGGCACAATGCTTCACAATAAACAACACAGCAGATACAGCCTTCTGTAGAATTACAGATCATCTACTTCCAGATGCTTAGGTGGATTAATAATTAATTGATTTAAATCCAAATAATTTTGTATAAAAGCTTTACATTTGTAATGAATCTTTTTTGTTCTAAGACAAATATTAGCGGCATATTAAACATGTCAGTCATCAGGAGAGAACTAGATCACTGACATACTAAATCAGCAGTAGTCCTGTCAGCTGGGACCAACTGATCTGAACATTATAAAGCCAGAGAGGACTAGCTAGTGTTACACACGAGGAGGAGCAGGCTACAGCAGTACAGATAGGACTAGTGTTATCATAGTACAGGAGGAACTGGTTACAGCCCTACACATCTGTAATGACAGGGTCACTACAACAGGCCAGCATACACCCTTCAACAACAGACTGAAGGAAGACTAAAGAACTCGCCTACCTGGAGTCTTCACCTGTCTGACCTCTAACCTTCCATCCTCCGTCCAACCTACTGTTTACCATACTGGAGCTCACATTGACTAGATCAGGGTAGATAGACTTTAGTTTTACGTTAAAAaagactgtaaaatcaccaggaattcagctAAAAATGACTTTAGTTTAGGAAATGTttccaagtattcccacaaaAAAAAAGACGTGTCTCAATGTATGAAatgattgttattttcaaatagcATTTATTTTTtggcttagttgtggtcaatttgcagtgtaacTAATCAAAAGAGAACTATCACGCTCTCCCAGAAGCTTGGCTGGTGCATAAAACCTGTGAATTCAGACAAACAAAGAGGTGTAATGGGTTCACAAAATATGTTGCATAAAGCTTACTTCATTATTCAATATGTTACATTTTTCTACTGCATCAGGGATAGCGTACACAGATGTTTCGTCTTTACAGCCTTcttcagtgtgtgtacagtgtacaaattattataataattttcCATGCCCCCGACCATCCtcctgaatctagttgcctacccctggaTTACAGTAGATATCTTTAGTTCCATAGGCAGGAGCAGTCTAGAGGTTCCTGGAAGCTGTAGTCCACCAGGGTAGCATTGCGTGAGCAGTAGAGGGTGACGGAGCGGGATTGTAGTCCACTCTCTCTGCAGCACTTACAGAAGCGGGCGTGGCTGTTGATGTTGAAGTTAAAGATGGTGGCAGACGGACACTTCCCATCACACGAA

Function

NR:

description
otogelin, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40758 True 1675 lncRNA 0.48 3 34137755 34139621

Neighbor

gene id symbol gene type direction distance location
LOC110521650 LOC106573438 coding downstream 97316 34025185 ~ 34040439 (-)
si:ch1073-390k14.1 LOC106573523 coding downstream 119312 34009280 ~ 34018443 (-)
LOC110521614 LOC106573524 coding downstream 135473 33983377 ~ 34002282 (-)
LOC118966666 LOC106573442 coding downstream 175659 33959328 ~ 33962096 (-)
rbm28 rbm28 coding downstream 183820 33944834 ~ 33953935 (-)
iqsec3b LOC106573430 coding upstream 60734 34200355 ~ 34245388 (-)
LOC118964492 NA coding upstream 157066 34296687 ~ 34302605 (-)
LOC110521742 LOC105022204 coding upstream 319807 34459428 ~ 34466711 (-)
LOC110521764 LOC106573421 coding upstream 334347 34473968 ~ 34490179 (-)
cpt1 cpt1 coding upstream 507764 34647385 ~ 34660153 (-)
G36050 NA non-coding downstream 12287 34125257 ~ 34125468 (-)
G36045 NA non-coding downstream 22713 34114820 ~ 34115042 (-)
G36030 NA non-coding downstream 51418 34086088 ~ 34086337 (-)
G36028 NA non-coding downstream 53430 34083905 ~ 34084325 (-)
G35986 LOC106573441 non-coding downstream 69744 33974275 ~ 34068011 (-)
G36202 NA non-coding upstream 209492 34349113 ~ 34447603 (-)
G36209 NA non-coding upstream 228529 34368150 ~ 34451770 (-)
G36438 NA non-coding upstream 330205 34469826 ~ 34471046 (-)
G36471 NA non-coding upstream 381685 34521306 ~ 34521569 (-)
G36491 NA non-coding upstream 413057 34552678 ~ 34554757 (-)
G35628 NA other downstream 269710 33867558 ~ 33868045 (-)
G35299 NA other downstream 685342 33442368 ~ 33452413 (-)
G35075 LOC106573452 other downstream 1029258 33107119 ~ 33108497 (-)
G33386 NA other downstream 2151605 31984771 ~ 31989249 (-)
LOC110521048 LOC100194695 other downstream 2692806 31426123 ~ 31444964 (-)
G36141 NA other upstream 138079 34277700 ~ 34362736 (-)
G36196 NA other upstream 201941 34341562 ~ 34381232 (-)
G37310 LOC106573403 other upstream 1134088 35273709 ~ 35278005 (-)
G37907 NA other upstream 1301297 35440918 ~ 35441328 (-)
G37976 NA other upstream 1443671 35583292 ~ 35583608 (-)

Expression


Co-expression Network