G36579


Basic Information

Item Value
gene id G36579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 34698799 ~ 34703817 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU41366
aatacaacaggtgtagaccttacagtgaaatgcttacttacaggctctaaccaatagtgcaaaaaatgtattaggtgaacaataggtaagtaaagaaataaaacaacagtaaaaagacaggctatatacagtagcgaggctacatacagacaccggttagtcaggctgattgaggtagtatgtacatgaatgtatagttaaagtgactatgcataaatgataaacagagagtagcagcagcgtaaaaataggggttggggaggcacacaatgcaaatagtccgggtagccatttgaatacctgttcaggagtcttatggcttgggggtaaaaactgttaagaagcctttttgtcctagatttGGCACTCtgataccgcttgccatgtggtagtagagaaaacagtctatgactggggtggctggagtctttgacaatttttagggccttcctctgacaccgcctggtgtagaggtcctggatgacaggcagcttagccccagtgatgtactgggccgtacgcactaccctctgtaatgccttgtggtcagaggccgggcaattgccgtaccaggcagtgatgcaaccaggctgtcgatgttgcagctgtagaaccttttgaggatctcaggacccatgccaaatcttttttagtttcctgagggggaataggctttgtcgtgcccttatcacgactgtcttggtgtgtttggaccattctagtttgttgttgatgtggacaccaaggaacttgaagctctcaagctgctccactacagccccgtcgatgagaataggggcgtgctctgtcctccttttcctgtagtccacaatcatctccttagtcttggttacgttgagggataggttgttattctggcaccacccggccaggtctctgacctcctccctataggctgtctcgtcgttgtcggtgatcaggcctaccactgttgtgtcggggtattgtgtgtagattagtgacacaaaatctacattttatcaattttaaattcaggctgtaacacagcaaaatgtggaaaaagtctaggggtgtgaatactttcggaaggcactgtagTTCTAAAATGACAACGGTGAATGATGTAGTAGGTAAAATGTCACTTCTTGACAGCATTGCGGGGATTGGGGCACTCGCAGATGCTGAGTAGGGATGGGGGCCCTCCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41366 True 1188 lncRNA 0.46 2 34698799 34703817

Neighbor

gene id symbol gene type direction distance location
zp2.3 zp2.3 coding downstream 7840 34686750 ~ 34690959 (-)
LOC110521923 LOC106573414 coding downstream 34328 34659087 ~ 34664471 (-)
cpt1 cpt1 coding downstream 38646 34647385 ~ 34660153 (-)
LOC110521764 LOC106573421 coding downstream 208620 34473968 ~ 34490179 (-)
LOC110521742 LOC105022204 coding downstream 232088 34459428 ~ 34466711 (-)
LOC118947385 NA coding upstream 152644 34856461 ~ 34868295 (-)
LOC110521966 rabl2a coding upstream 577468 35281285 ~ 35285817 (-)
odf3b odf3b coding upstream 582724 35286541 ~ 35287452 (-)
LOC110520384 LOC106573404 coding upstream 610136 35313953 ~ 35316192 (-)
LOC110532260 NA coding upstream 730978 35433794 ~ 35694776 (-)
G36491 NA non-coding downstream 144042 34552678 ~ 34554757 (-)
G36471 NA non-coding downstream 177230 34521306 ~ 34521569 (-)
G36438 NA non-coding downstream 227753 34469826 ~ 34471046 (-)
G36209 NA non-coding downstream 247029 34368150 ~ 34451770 (-)
G36202 NA non-coding downstream 251196 34349113 ~ 34447603 (-)
G36585 NA non-coding upstream 2083 34705900 ~ 34706163 (-)
G36588 NA non-coding upstream 9388 34713205 ~ 34808214 (-)
G36674 NA non-coding upstream 114512 34818329 ~ 34819021 (-)
G36680 NA non-coding upstream 119422 34823239 ~ 34823474 (-)
G36701 NA non-coding upstream 135585 34839402 ~ 34839649 (-)
G36196 NA other downstream 317567 34341562 ~ 34381232 (-)
G36141 NA other downstream 336063 34277700 ~ 34362736 (-)
G35628 NA other downstream 830754 33867558 ~ 33868045 (-)
G35299 NA other downstream 1246386 33442368 ~ 33452413 (-)
G35075 LOC106573452 other downstream 1590302 33107119 ~ 33108497 (-)
G37310 LOC106573403 other upstream 569892 35273709 ~ 35278005 (-)
G37907 NA other upstream 737101 35440918 ~ 35441328 (-)
G37976 NA other upstream 879475 35583292 ~ 35583608 (-)
G38045 LOC106573386 other upstream 1017623 35721440 ~ 35722056 (-)
LOC110522187 LOC106573361 other upstream 1666277 36370091 ~ 36409064 (-)

Expression


Co-expression Network