G36654


Basic Information

Item Value
gene id G36654
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 34810623 ~ 34810839 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU41449
ACGCTCTCTATAGAACTACTAAAGGAAAGTCCTtatttccagtgtgtgagtgtgactcCAATTTTTGGCCAGTACATGCTGTAATTGTATGTTTTGTATCCCACTCGACTACAGACACTGGGGACATGCCCAACACAGCTCTGAGAGGCTACACCAAACATTAACACGCAGCCGGGCCGGAACGAGCTGCCACTGACAACCGACCCAGTCATCACCC

Function

NR:

description
transposase-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41449 True 217 lncRNA 0.49 1 34810623 34810839

Neighbor

gene id symbol gene type direction distance location
LOC110521947 LOC106573413 coding upstream 2373 34763838 ~ 34808250 (+)
LOC110521911 LOC106573416 coding upstream 163618 34632990 ~ 34647005 (+)
bend7 bend7 coding upstream 180185 34534461 ~ 34630438 (+)
LOC110521897 NA coding upstream 190496 34619037 ~ 34620127 (+)
LOC110521894 NA coding upstream 194058 34611315 ~ 34616565 (+)
LOC118964549 shank3 coding downstream 296121 35106960 ~ 35178445 (+)
LOC110521950 LOC106573403 coding downstream 387842 35198681 ~ 35281121 (+)
LOC118966681 NA coding downstream 551976 35362815 ~ 35365674 (+)
LOC110521975 LOC106561266 coding downstream 571894 35382733 ~ 35435548 (+)
LOC110521983 LOC106573386 coding downstream 898985 35709824 ~ 35731063 (+)
G36651 NA non-coding upstream 1317 34809080 ~ 34809306 (+)
G36362 NA non-coding upstream 116435 34693973 ~ 34694188 (+)
G36344 NA non-coding upstream 119601 34641555 ~ 34691022 (+)
G36341 NA non-coding upstream 179392 34630992 ~ 34631231 (+)
G36659 NA non-coding downstream 2000 34812839 ~ 34813081 (+)
G36681 NA non-coding downstream 13553 34824392 ~ 34824610 (+)
G36714 NA non-coding downstream 40944 34851783 ~ 34852619 (+)
G36757 NA non-coding downstream 99676 34910515 ~ 34910942 (+)
G36836 NA non-coding downstream 223552 35034391 ~ 35034617 (+)
LOC110521835 LOC106573423 other upstream 318864 34490120 ~ 34507419 (+)
G35700 NA other upstream 850176 33960060 ~ 33960447 (+)
G35699 NA other upstream 851942 33958097 ~ 33958681 (+)
G34963 NA other upstream 1107161 33701777 ~ 33703462 (+)
G37450 NA other downstream 780551 35591390 ~ 35591927 (+)
LOC110522073 LOC106573381 other downstream 1076660 35815461 ~ 35891607 (+)
LOC110522113 LOC106573380 other downstream 1123338 35922982 ~ 35938680 (+)
rad52 rad52 other downstream 1322693 36133477 ~ 36140940 (+)

Expression


Co-expression Network