G36848


Basic Information

Item Value
gene id G36848
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 35045877 ~ 35046076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU41683
gaatatggttgatatccctttaaatggagcaatgggaggctatggaacatggagttttcaaaatagaagccacttcctggtttgatttttctcagggtttcgcctgcaatatcagttctgttatactcacagacaatattttgacagttttggaaactttagagtgttttctatcctaatctgtcaattatatgcatatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41683 True 200 lncRNA 0.33 1 35045877 35046076

Neighbor

gene id symbol gene type direction distance location
LOC110521947 LOC106573413 coding upstream 237627 34763838 ~ 34808250 (+)
LOC110521911 LOC106573416 coding upstream 398872 34632990 ~ 34647005 (+)
bend7 bend7 coding upstream 415439 34534461 ~ 34630438 (+)
LOC110521897 NA coding upstream 425750 34619037 ~ 34620127 (+)
LOC110521894 NA coding upstream 429312 34611315 ~ 34616565 (+)
LOC118964549 shank3 coding downstream 60884 35106960 ~ 35178445 (+)
LOC110521950 LOC106573403 coding downstream 152605 35198681 ~ 35281121 (+)
LOC118966681 NA coding downstream 316739 35362815 ~ 35365674 (+)
LOC110521975 LOC106561266 coding downstream 336657 35382733 ~ 35435548 (+)
LOC110521983 LOC106573386 coding downstream 663748 35709824 ~ 35731063 (+)
G36847 NA non-coding upstream 505 35045164 ~ 35045372 (+)
G36843 NA non-coding upstream 3850 35041725 ~ 35042027 (+)
G36842 NA non-coding upstream 4923 35040715 ~ 35040954 (+)
G36836 NA non-coding upstream 11260 35034391 ~ 35034617 (+)
G36757 NA non-coding upstream 134935 34910515 ~ 34910942 (+)
G36861 NA non-coding downstream 15762 35061838 ~ 35062040 (+)
G36863 NA non-coding downstream 18516 35064592 ~ 35064793 (+)
G36864 NA non-coding downstream 19003 35065079 ~ 35065297 (+)
G36877 NA non-coding downstream 36179 35082255 ~ 35082508 (+)
G36881 NA non-coding downstream 42428 35088504 ~ 35088732 (+)
LOC110521835 LOC106573423 other upstream 554118 34490120 ~ 34507419 (+)
G35700 NA other upstream 1085430 33960060 ~ 33960447 (+)
G35699 NA other upstream 1087196 33958097 ~ 33958681 (+)
G34963 NA other upstream 1342415 33701777 ~ 33703462 (+)
G37450 NA other downstream 545314 35591390 ~ 35591927 (+)
LOC110522073 LOC106573381 other downstream 841423 35815461 ~ 35891607 (+)
LOC110522113 LOC106573380 other downstream 888101 35922982 ~ 35938680 (+)
rad52 rad52 other downstream 1087456 36133477 ~ 36140940 (+)

Expression


Co-expression Network