G37310 (LOC106573403)



Basic Information


Item Value
gene id G37310
gene name LOC106573403
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 35273709 ~ 35278005 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU42180
taatatataTCAAAGGGTCCTATAATGATTACAGATTTGGAGTTCagtctgtgtctctgtttgtgcaaatgtgtgtgtgcaccacgtgtgagtgtgtttgtgtgagacacAGCCACTGCCAGGAATCTCTGATGGTATTAAGGCTACAGTGGACTCACTTCGAGGGTTTGAACtagcgcacacacatacatacacgcaccacacagaggagaggggggagtgtaCAGAGAGTCAGGGTGTTCCTCCCTTCACAGCCTGCATGCGCTGTAACGAATGGTGGCTGTATTGCTAGCACCGTGTTTTGTGCAAATCATCTCCTAGTTCAGAGTTCATAGAAAGAATACAATCTGATCACACATTTTTTCCTCAGTGATTAACTATGCATATATGCCAAAcattcatatatagatctatatattttttgattTTCAAAAATGTATATGAAAACTATCATATATACATTGCTTTTGATTAATATAAAAAAgcaaatatttgtattttgtcCATATTTACAGGGTGTACGTCATTTTGAGAGGTTTAAATACTTTAGTTTCTCTTTTTCTTGGTCACTCTGAAATTCAGATTAGGTGAGTGAATAGAAAAAGTTCTTAATGTCTTAATCCAAGAGCTACAAAATCCACCCCTACATTATGGGGGGGACATAAATAAACACAAACCAACAATCAACTCTTacattatgggggggggggggcgacataACAAATAAACACAAACCAACAATCAACTTTTACAttatgggtgggggggggggggacataacaAATAAACACAAACCAACAATCAACTTTTACattatggagggggggggggggggggggcggcgggGGCATAACAAATAAACACAAACCAACAATCAACTCTTacattatggggggggggggggtgggggcatAACAAATAAACACAAACCAACAATCAACGCTTacattatggagggggtgggggCATAACAAATAAACACAAACCAACAATCAACTCTTacattatgCAGGGGGGGACATAACAAATAAACACAAACCAACAATCAACCCCACACAAAAGCCTAAATGAGTCAGACGGTATGGTAGTGGCCCAAAATATATCCTTTTCCTTAAATAGTGCCACAAAATGTAAAATGGAGGGCACTATAGGGATAAGGGTGTCATTTAGAACACCCCGCATGTTGTCCAGAATCAGGAGTGAGATCGTCTGTGAGGTCCAATGTGAGACAGTGAGCGTTATCCCTACAACCTTCACACAACGTTGAATTTACCACCTGTTAAATGGATACAAAGGAACGTTTCACAGAGATAGATTGCCAAGGATCTTAACTGAGCATAAAGGTTTCAGTGCTACTGTTGACTAGTTAAGGTTTTAGTGGTAGTCGAGCccacctgggtcatgttcagggGAGTCCAATGTTAAACATCAATGTAGATAGTCATGTATTATAGAGAACAGACATGCTTCACTGTTGAGAAACCTATACTACATATTCTTTACCTACAAAAGCAAAAAATCAACTTGTATAATAGCGAATCATGTTTGTTCTTTATAAGACGTCCATGACTGTTGTACCATGTCAGGTCTAtttgctgctattggaccaggtctctcttggaaaagagatgttatctcaaggagaaaaaacctgtataaataaaggtcaaataaatcaaatcaaataaatctGCGGTATTCAGAATGTTGCTCCCTCTTAAACGCACCACTGTTGTTCTCccgttgtgttgttgtgtgtatgGATGACACTCACTGTCTCTAACCATTGAGAGAAGCTATTCACATTACAATTGTTGATTTCTTAAGACATCTCGTTCTATAACCCAAACCATGGTCTGAGATGTAGATAATGATGCTACTGGTCTTAGGTTGGATGAggattgtgtctgtgtctgtgtgtgaatctaagtgtgttATTTGTTTGACCAGGTGAATGTtcatgtgtgtacagtatatatagatgtaagatcttcatttgagccagtttgctatagcaggaaaataatcctgcagcaacaggaaatgtgaattattattatattataattaatggacattttttgtaggggttgatacaaaatcaagtctgacatttcaaagtgtaaattacaaacttcagaagcctacAAGCACTACAAGTGCAGGAAAGTTGCAGGAAAGTTATTCTGCAACAGGCTGATAATTAAGACTCTATCTGTGTATGTCTACATCTGAGTATGTGTTGAGGTCACTGGGTTTAAACTGGGGTCAACTGTGGTTTCACACCCCTCACTGTGTGGGATACCCTTCAGCATGACGGAAGACCGCAAGAAAACAAGCGGAAACGAAAACACAACCTTCTGTTCAAGACGTGATGCAACTTCTCATGCTACTGTTCAGGAAAGAGTGACCATAGAAGGACAGTTAATCAATAGGGTGTTGTATATTGAATATGTATAGTTTTAGTAAAGTTGTATATTTTATGAAATCTATACACCTtctttcaaatatatatatatatatatatatattattggtaaaaacaagaaaattgttgGTGGAATAAATGTTAAAGTTTTCTCTCTGTACTCTGTCTAGAAGTAGGAGTCAGATGCTCTGTATATAACGTATCTTTTTTTCAACGTTCTGTCGTCCCCCCCCCTCAAAgctatttaaatacatttatattatatatatttataatattcCCTTTGGAAACCCAAAGCAAATGTTTTGATTATGAAAAAAGCCACTAGTGTTGGTTAAACATTCTCAAAATATAATAGATAGCACAGTCAGTCCGTGAGACAGTCCCAGGATAGATGAGTTCTCCCCACGTGGTCTCCAACACCAAACTCTGTCTCTGGGCACAAGTGTTGAACACAATGCCAGGCAGAGTGGAGAGAGGCCTGTGTCAGTACTGTATCAGTATGTCAGTTCTATGTCAATACTAGGTCAGTACTGTATCAGTATGTCAGTTCTATGCCAAAACTAGGTCAGTACTGTATCAGTATGTCAGTTCTATGTCAATACTAGGTCAATACTGCGTCTTTACTCCTGTGTTCAACGTAGCTGATCTCTGTAAGAATATTTTGAAAGGCAACTGAACTTTCCGTTTGGAACGAgattcatcctcctcttcttcacacAAACTGGGGATCCTTCAGAGGCAAAAAATGAAcaggagggaaagagatggaggtACAGGGAGAAGAAGAACGGCACAGTGAAGGAAAGGTCTGTGGGTAGGTTAAAGGTGTGACTAAAGGAGCAACTCAAGCAGTCACAAATCAAATGTTCTAATCGGAGCTCATGCGAGATTCTGTTCTGCAAAGAGTTTATGTGCCTCTTTCAGAGGACTCATCTGATAGGTTGTGAGATGGGGGAGGGACTTCATAATTCAGTGCAGTGCTGAGAGCTGCATATGAACGCAATCACTGAAACTTTCAGACACAtcagaataaaaataaatgaaaagcaGCGACCTAAAATGGAGTTTAAAACTGGGGTGGTCTatccatttttctctctccctctttctttctttctctctctctctctctctctctctctcagggcaggGGTCAGCTCTCCAGCAGCTGTTTGAGTGCTCGTTCGATGTTCATGCGGTGTCCCACCCGCGTCACCCCCAGCTCAGCAAAGTCGTCCTTGGTGAGTGCTGGCAGGTGCGAGCCCTCAATCTCATGCTCCTGAAAGCCGGCCCTGTGCTCCCCCAGGTGGATGCTCTCCAGCCAGTCTCCAACGTCGTACTTGTTCCACAGGTGGAGGGGCTTCTGGTGGAAGGGCCTGAGGGCCAGGAGGGGCGAGCCCAACccaggagagtgagagggagacggggagcgGGACCGGGCGCTGGAGCTCCTCATAACAAAGCGCACTTCTTTGGGCTCATGGGGCAGGCTGAGGCTGGATGACTTGAGGATGGTGTGGGGCGGCGTGGTGGGCGAAATGGGTAAGCCGAAGCCTGGGAGTCGACTTAGGGGGTCACCCCGATCTGGGGAGCCCGAGCCGGGGCTTGGGATTCGGCGTGTTATGGGGTAGCGGCTGCCGGGCCGGATGGTGTAGGAAGTGCCGTAGCTTCTCTGGGAAATGGTGTGGAGCTCTCCTAGACTGCTGAAAAGTCTGGAGGAGAGAGcgaaagattgagagagagagagagagagagagagagagagagagagagagagagagagagagaaggagagggtgtttgggagggaaagaggt

Function


NR:

description
SH3 and multiple ankyrin repeat domains protein 3-like isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU42180 True 4248 TUCP 0.43 2 35273709 35278005

Neighbor


gene id symbol gene type direction distance location
LOC118947385 NA coding downstream 405414 34856461 ~ 34868295 (-)
zp2.3 zp2.3 coding downstream 582750 34686750 ~ 34690959 (-)
LOC110521923 LOC106573414 coding downstream 609238 34659087 ~ 34664471 (-)
cpt1 cpt1 coding downstream 613556 34647385 ~ 34660153 (-)
LOC110521764 LOC106573421 coding downstream 783530 34473968 ~ 34490179 (-)
LOC110521966 rabl2a coding upstream 3280 35281285 ~ 35285817 (-)
odf3b odf3b coding upstream 8536 35286541 ~ 35287452 (-)
LOC110520384 LOC106573404 coding upstream 35948 35313953 ~ 35316192 (-)
LOC110532260 NA coding upstream 156790 35433794 ~ 35694776 (-)
LOC110522006 LOC106573384 coding upstream 464645 35742650 ~ 35749599 (-)
G37196 NA non-coding downstream 162414 35110630 ~ 35111295 (-)
G37184 NA non-coding downstream 182334 35091116 ~ 35091375 (-)
G37181 NA non-coding downstream 188483 35084985 ~ 35085226 (-)
G37180 NA non-coding downstream 188789 35084576 ~ 35084920 (-)
G37178 NA non-coding downstream 190734 35082632 ~ 35082975 (-)
G37322 NA non-coding upstream 21328 35299333 ~ 35299619 (-)
G37323 NA non-coding upstream 22173 35300178 ~ 35300431 (-)
G37329 NA non-coding upstream 34814 35312819 ~ 35313055 (-)
G37901 NA non-coding upstream 146235 35424240 ~ 35424504 (-)
G36196 NA other downstream 892477 34341562 ~ 34381232 (-)
G36141 NA other downstream 910973 34277700 ~ 34362736 (-)
G35628 NA other downstream 1405664 33867558 ~ 33868045 (-)
G35299 NA other downstream 1821296 33442368 ~ 33452413 (-)
G35075 LOC106573452 other downstream 2165212 33107119 ~ 33108497 (-)
G37907 NA other upstream 162913 35440918 ~ 35441328 (-)
G37976 NA other upstream 305287 35583292 ~ 35583608 (-)
G38045 LOC106573386 other upstream 443435 35721440 ~ 35722056 (-)
LOC110522187 LOC106573361 other upstream 1092089 36370091 ~ 36409064 (-)
G38855 NA other upstream 1230533 36508538 ~ 36510829 (-)

Expression



Co-expression Network