G38045 (LOC106573386)



Basic Information


Item Value
gene id G38045
gene name LOC106573386
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 35721440 ~ 35722056 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU43028
TGGGGCTGGCCTTGTCTGGGCCCAGCTGAGACAGAACAAAGTGTGGGGCCGTGGCGCTGTCTGCATCAAACACGTCCATGCTGTCCTCTGGGGGTGCAGGTTTGGCCCCGGGCCGCTGGCGGGGGGTGCGTTTACGGGACTTGCGGGGCACCTCTGTGTTGTCGTTGTAGGAGTTGGAGCTGACCAGGCTGAAGTTGGAGGCCGAGTCGTCAGCCCAGATGCTGCTGCTGTGTTCTGAGTCTGGACCTGCTGGCCCGGCCGGGGCTGGATTCTCCTGGCAGGACATACTGCTGTCGTCAAACAGGTCTTCCGGAGGGGGGGAGATGCTCAACACTGGCCTCCGCTTAGAGGGGGTGTTCTGGGGCTGCTGCTGGGATCCCACCCCCCCTGCTCCTGGGTCTCCTTCTCCTGTTCCAGAGCTGGTCCCATTGCCGCCTCCACCTTCAGAGGCAGACAGAGCTCCCTCCACCCCTTCCCTCTCGGATCCTTCTGGGGCTCCGGACCCCTCTCTGGGGGCCCCACtgggatggtggaggaggagaggaggctgggACTGGTCCATGGCTGAGGTAGAAGGGGCCGAGCTGGGGCCTCCCGTGGCCAAAGAGGATGGAGAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU43028 True 617 TUCP 0.55 1 35721440 35722056

Neighbor


gene id symbol gene type direction distance location
LOC110532260 NA coding downstream 26664 35433794 ~ 35694776 (-)
LOC110520384 LOC106573404 coding downstream 405248 35313953 ~ 35316192 (-)
odf3b odf3b coding downstream 433988 35286541 ~ 35287452 (-)
LOC110521966 rabl2a coding downstream 435623 35281285 ~ 35285817 (-)
LOC118947385 NA coding downstream 853145 34856461 ~ 34868295 (-)
LOC110522006 LOC106573384 coding upstream 20594 35742650 ~ 35749599 (-)
LOC110521997 LOC100196677 coding upstream 28249 35750305 ~ 35753348 (-)
LOC110522154 LOC105022174 coding upstream 170451 35892507 ~ 35914512 (-)
cax2 LOC106573379 coding upstream 217686 35939742 ~ 35961413 (-)
armc10 armc10 coding upstream 249275 35971331 ~ 35982887 (-)
G38044 NA non-coding downstream 919 35720235 ~ 35720521 (-)
G38010 NA non-coding downstream 14680 35647749 ~ 35706760 (-)
G37996 NA non-coding downstream 103870 35617356 ~ 35617570 (-)
G37993 NA non-coding downstream 107788 35613444 ~ 35613652 (-)
G37986 NA non-coding downstream 122885 35598313 ~ 35598555 (-)
G38046 LOC106573386 non-coding upstream 1762 35723818 ~ 35724185 (-)
G38047 LOC106573386 non-coding upstream 2252 35724308 ~ 35726101 (-)
G38049 NA non-coding upstream 10286 35732342 ~ 35732680 (-)
G38050 NA non-coding upstream 12720 35734776 ~ 35734989 (-)
G38059 NA non-coding upstream 20230 35742286 ~ 35742503 (-)
G37976 NA other downstream 137832 35583292 ~ 35583608 (-)
G37907 NA other downstream 280112 35440918 ~ 35441328 (-)
G37310 LOC106573403 other downstream 443435 35273709 ~ 35278005 (-)
G36196 NA other downstream 1340208 34341562 ~ 34381232 (-)
G36141 NA other downstream 1358704 34277700 ~ 34362736 (-)
LOC110522187 LOC106573361 other upstream 648038 36370091 ~ 36409064 (-)
G38855 NA other upstream 786482 36508538 ~ 36510829 (-)
G40079 NA other upstream 1994484 37716540 ~ 37717033 (-)
G40732 NA other upstream 2403224 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 2465432 38187488 ~ 38191736 (-)

Expression



Co-expression Network