G37572


Basic Information

Item Value
gene id G37572
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 35876235 ~ 35896072 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU42488
ccctctctgtccctctctcactcccactcaatctcgccctctctgtccctctctctcactcccactcactctcttgccctgtctttccttctctctccctcccactcactctctcaccctctctttccctctttctcactccaactcactctctcaccctctctctcacccccactcactctctcgccctctatgtccctctctcactcccacccactctcgcgctctctgtccctctctcactcccactcactctcgccctctctttacctctttctcactcactcccactcactctctcaccctctctttccttctctctcactcccactcactctctcaccccctctttccttctctctccctcccactcactctctcatcctctctttccctctctctctctctctcacacacacacacacacactctctctcaggtGTTAAGTGGTGTGGTAGGTTGTCTTTGGTTGGTGAGCTGATGCTCCTGTCTACGGGGTGAAAGGCGTGTTTACAGAACAGTTTCTATGACAACCAGGGTGTGGTGGGTTGATAGGCTTGCATACTGGCCTCTGGGGCAAGGCCTGAAAGATGGGTCAACAACAGCCATATTGGATAGGTGGATCTGGATGAAACCCACCAACTGGTCCTCAGGAAGGAATGATCCTTGTTCCTGATGGTAGCTTCCAACCCCGTCCAAAGGAAGGCAGAAGATGACTTTCGAAATGGTGTAATTCCTCATTGTGGTAATAACTCCAGAGAGAGGGGGCCATGCACTAGAGACAGAGAGCTTCTGGTAGAGCATGGGGAGGAAAAAAATAGCTGTAACTGTTGAAACAGTGTTTCACTCACCAAATACAGAACAATTCTGAGAATTAAAAATCTAAACTGTGGTGGGGAGGGGGTACTGAGTAAACATTCCATCCCTGTCTCCGTCATGACAATGACAGTCTGACAGTCTTGTCTTCCCATGATGCTCTGCTCTCACCCTATCGTCGGTTCCATCATGGTTGGGTTAATCAGAATATCATCCAGACCGCAGGAGGGCATCTAGGATCATGGGAATGCTGCACTCCTTTCTGGGTAGGAGGGGGTAATAATGTGGGTGGGGTGGTGTTGGTAGAGGGCTATGGGTAAGTAATAAAGAATACCTAGACGAGGGGGAGACTGACATTTCACACCGCCACTTCTCATACATATAATCCATAAAAATCCTTGTTTGTTTAGTAATAAAACAATTGCCTTGTTTAAATATGAATATAATAGTTTGCTTCTGCTCTTTAGGAAATGATAGTCCGTGTGGGTGAGGGGAGGGCGGTTGCCAGCCCTTCACTACAACTCCATGTCCTGAGCCTCATCCTCAGAGAAGTCAGACATGGAACTCTCAGACGAGGAGTCACCTCCCTCCTCTTGCTCCTTTAGAGCCTCCTCTGTCGCATACTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU42488 True 1444 lncRNA 0.39 2 35876235 35896072

Neighbor

gene id symbol gene type direction distance location
LOC110522032 LOC106573385 coding upstream 109166 35753339 ~ 35767069 (+)
LOC110521983 LOC106573386 coding upstream 145172 35709824 ~ 35731063 (+)
LOC110521975 LOC106561266 coding upstream 440687 35382733 ~ 35435548 (+)
LOC118966681 NA coding upstream 510561 35362815 ~ 35365674 (+)
LOC110521950 LOC106573403 coding upstream 599181 35198681 ~ 35281121 (+)
LOC110522113 LOC106573380 coding downstream 26910 35922982 ~ 35938680 (+)
LOC110522059 LOC106573371 coding downstream 191064 36087136 ~ 36116437 (+)
rad52 rad52 coding downstream 237405 36133477 ~ 36140940 (+)
LOC110522068 erc1 coding downstream 304229 36200301 ~ 36231196 (+)
lrrn2 LOC106573362 coding downstream 452982 36349054 ~ 36353251 (+)
G37587 NA non-coding upstream 301 35840691 ~ 35875934 (+)
G37591 NA non-coding upstream 7123 35864417 ~ 35869112 (+)
G37589 NA non-coding upstream 30277 35844965 ~ 35845958 (+)
G37585 NA non-coding upstream 37818 35838050 ~ 35838417 (+)
LOC110522073 LOC106573381 non-coding upstream 38300 35815461 ~ 35891607 (+)
G37625 NA non-coding downstream 70178 35966250 ~ 35966479 (+)
G37631 lrrc17 non-coding downstream 80320 35976392 ~ 36009860 (+)
G37677 NA non-coding downstream 155509 36051581 ~ 36052174 (+)
G37742 NA non-coding downstream 298945 36195017 ~ 36316123 (+)
G37769 NA non-coding downstream 351604 36247676 ~ 36248425 (+)
G37450 NA other upstream 284308 35591390 ~ 35591927 (+)
LOC110521947 LOC106573413 other upstream 1082491 34763838 ~ 34808250 (+)
LOC110521835 LOC106573423 other upstream 1384476 34490120 ~ 34507419 (+)
G35700 NA other upstream 1915788 33960060 ~ 33960447 (+)
G37719 LOC106573365 other downstream 245001 36141073 ~ 36143962 (+)
G38652 NA other downstream 946536 36842608 ~ 36883892 (+)
G40149 LOC100136012 other downstream 1874873 37770945 ~ 37771468 (+)

Expression


Co-expression Network