Gene
RNA
| Item | Value |
|---|---|
| gene id | G38119 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 35942686 ~ 35943267 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Collagen-like protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU43117 | True | 348 | lncRNA | 0.38 | 2 | 35942686 | 35943267 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522154 | LOC105022174 | coding | downstream | 28174 | 35892507 ~ 35914512 (-) |
| LOC110521997 | LOC100196677 | coding | downstream | 189338 | 35750305 ~ 35753348 (-) |
| LOC110522006 | LOC106573384 | coding | downstream | 193087 | 35742650 ~ 35749599 (-) |
| LOC110532260 | NA | coding | downstream | 247910 | 35433794 ~ 35694776 (-) |
| LOC110520384 | LOC106573404 | coding | downstream | 626494 | 35313953 ~ 35316192 (-) |
| armc10 | armc10 | coding | upstream | 28064 | 35971331 ~ 35982887 (-) |
| LOC110522092 | lrrc17 | coding | upstream | 62235 | 36005053 ~ 36045196 (-) |
| fam185a | fam185a | coding | upstream | 94270 | 36037537 ~ 36047583 (-) |
| LOC110522040 | LOC106573374 | coding | upstream | 123679 | 36066946 ~ 36070858 (-) |
| LOC110532269 | LOC106573375 | coding | upstream | 131683 | 36074950 ~ 36080429 (-) |
| G38147 | NA | non-coding | downstream | 82 | 35942360 ~ 35942604 (-) |
| G38139 | LOC106573381 | non-coding | downstream | 51027 | 35888587 ~ 35891659 (-) |
| G38126 | NA | non-coding | downstream | 79224 | 35862825 ~ 35863462 (-) |
| G38059 | NA | non-coding | downstream | 200183 | 35742286 ~ 35742503 (-) |
| G38224 | NA | non-coding | upstream | 163337 | 36106604 ~ 36107897 (-) |
| G38229 | NA | non-coding | upstream | 165131 | 36108398 ~ 36108872 (-) |
| G38269 | NA | non-coding | upstream | 247896 | 36191163 ~ 36191567 (-) |
| G38223 | NA | non-coding | upstream | 283435 | 36226702 ~ 36231191 (-) |
| G38045 | LOC106573386 | other | downstream | 220630 | 35721440 ~ 35722056 (-) |
| G37976 | NA | other | downstream | 359078 | 35583292 ~ 35583608 (-) |
| G37907 | NA | other | downstream | 501358 | 35440918 ~ 35441328 (-) |
| G37310 | LOC106573403 | other | downstream | 664681 | 35273709 ~ 35278005 (-) |
| G36196 | NA | other | downstream | 1561454 | 34341562 ~ 34381232 (-) |
| LOC110522187 | LOC106573361 | other | upstream | 426827 | 36370091 ~ 36409064 (-) |
| G38855 | NA | other | upstream | 565271 | 36508538 ~ 36510829 (-) |
| G40079 | NA | other | upstream | 1773273 | 37716540 ~ 37717033 (-) |
| G40732 | NA | other | upstream | 2182013 | 38125280 ~ 38125725 (-) |
| G40768 | LOC106573348 | other | upstream | 2244221 | 38187488 ~ 38191736 (-) |
