G38224


Basic Information

Item Value
gene id G38224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 36106604 ~ 36107897 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU43241
gggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggtgggggggggggggggggggggggggggggggggggggggggtggggggggggggggggggggggggggggtggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggtggggggggggggggggggggggggggtggggggggggggggggggggggggggggggtggggggggggtgggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggtgggggggtgggggggggggggggggggggggggtggggggtggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggtggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggtgggggggggggggggggggggggggggggggggggggggggggggtgggggggggggggggggggtgggggggggggggggggggggggggggggggggggggggggggggggggggggggtgggggggggggggggggggggggggggggggggggggggggggggggggagggggggggggggggggggggggggggggggggggggggtggggggggggggggggggggggggggggtggggggggggggg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU43241 True 892 lncRNA 0.98 3 36106604 36107897

Neighbor

gene id symbol gene type direction distance location
LOC110532269 LOC106573375 coding downstream 26175 36074950 ~ 36080429 (-)
LOC110522040 LOC106573374 coding downstream 35746 36066946 ~ 36070858 (-)
fam185a fam185a coding downstream 59021 36037537 ~ 36047583 (-)
LOC110522092 lrrc17 coding downstream 74425 36005053 ~ 36045196 (-)
armc10 armc10 coding downstream 123717 35971331 ~ 35982887 (-)
tmem60 LOC106573373 coding upstream 11374 36119271 ~ 36120989 (-)
LOC110522098 LOC106573370 coding upstream 13773 36121670 ~ 36131381 (-)
LOC110522050 LOC106573365 coding upstream 33154 36141051 ~ 36189706 (-)
LOC110522124 fbxl14 coding upstream 123590 36231487 ~ 36234308 (-)
LOC110522087 NA coding upstream 153291 36261188 ~ 36264106 (-)
G38119 NA non-coding downstream 163337 35942686 ~ 35943267 (-)
G38147 NA non-coding downstream 164000 35942360 ~ 35942604 (-)
LOC110522154 LOC105022174 non-coding downstream 206952 35892507 ~ 35914512 (-)
G38139 LOC106573381 non-coding downstream 214945 35888587 ~ 35891659 (-)
G38229 NA non-coding upstream 501 36108398 ~ 36108872 (-)
G38269 NA non-coding upstream 83266 36191163 ~ 36191567 (-)
G38223 NA non-coding upstream 118805 36226702 ~ 36231191 (-)
G38314 NA non-coding upstream 172451 36280348 ~ 36281267 (-)
LOC110522167 LOC106573363 non-coding upstream 182958 36290706 ~ 36322277 (-)
G38045 LOC106573386 other downstream 384548 35721440 ~ 35722056 (-)
G37976 NA other downstream 522996 35583292 ~ 35583608 (-)
G37907 NA other downstream 665276 35440918 ~ 35441328 (-)
G37310 LOC106573403 other downstream 828599 35273709 ~ 35278005 (-)
G36196 NA other downstream 1725372 34341562 ~ 34381232 (-)
LOC110522187 LOC106573361 other upstream 262197 36370091 ~ 36409064 (-)
G38855 NA other upstream 400641 36508538 ~ 36510829 (-)
G40079 NA other upstream 1608643 37716540 ~ 37717033 (-)
G40732 NA other upstream 2017383 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 2079591 38187488 ~ 38191736 (-)

Expression


Co-expression Network