G37777


Basic Information

Item Value
gene id G37777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 36266306 ~ 36269405 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU42740
CTTTAGAGGCTAAGGACATTAATAGTATAATGAAAATGTAATGCTCGTAACAGTAGGCATATAGCCAATACACTTAAAAAACGATAATACAATCAAATATAATCTAAAATTATTAGTATTGTCACCATCAGCAATCTTAATAGGCTATGTTCGCAATATCCGTCAAGTGACACACGGCACGGGACTACTGTACGCGCCGCACGCGCTAAAGAGTTCCGTGACACTGACGAACTGTTCAccagcagcaggaggagagggatgagggcagCATGGATTACTCCCTCTCTACTGGGTTAAGATGCTTACCAACTAATTACCTTTCCATCTGAAAATCCCCGACCACGCAGCCCCAACAGACCGAGTGctaggagagatgaagagatagaggGACGGGGAGGCCGGTggtggaaagaggagaggatgggtgtTTGTGTTTCTTTTTTCATTTCAGGAGGAGGATGCTGTCCTTTGGGTGATGTGGCCTTCGTTCAGGTCTATTGACGATTTCTTCCAGAAGCGGGAAGAGGAGCTCTGGGACCCATTTGGAGCATCTCAAAAATCACTTAGTGCATTATTCCACACGGCTGTGATCAATCTTCGAGCTGGGTAGTGGGTCTGCATGGCACAGAGATGAATGTCTGCCCCTTTCTCCATGTCCCGATAAGGGATGTTTGTTGTAACCTGTTTGTTTTAACCCGATGGACAGAAGGCATGTGCAACGCAGCCCATGAGGACATGGATATAAGAAACTTGTTGCGGATTTTAATATTTTAAGTGGTAGTATTGAATacatggctaatgctgtgttgAACGACATGTTGGAACACATTCTTTTAGAACACATAGAGAATAATTATTATCTGTGTAGTGTGGAGTAAGGTCTGGTGTTTAAGTCATGCATTTCATTCAAGCCCTGCCTTTCTGCCCCGTTCATTCCCCTTTTGTGGATCAGAAACAAGGTAGAAGATGTATGCAATAATTTGACTTGAGTTTCTATCATATTTCTCTGACCTATCCAAGTTCACAGGGGCGGGCGGCCTGTCCATCTGGCATTTTGGgtaatgccagatgggctggtcaaTTTTTAGCCCAGTTGGACTGTCTAACTTGTGCCCCTCAAGGAACAAAATGGGCTGGTGTGGGGGCCTCAAAGAAAAAACAGAGTGGCTGTGGTTCTGGATCTTCTGTAACCCGACTTTCTGTTTCTAAAAATGATACGTAGATTTCTGCGGGATCCACTAGCCTACCTCCTTTCAGCTGTTGTTCAGTAATAATGGGAAGTTCTTACCGACTCAGATCTTTTTGACTCAGTCAAAAGAATGAATCAAGCTCGTTCTATTCATTTGATTCAGTAATGCCCAGAGCATGCAGGACCCCTACCGGCGAATGATGAACTAAAAGCTCGAAGGAATCATGATTGCACAAGTCTCTCATTCACCATAGGAGGCTTGTTGGAGCTGCCATTTGTGACTGAAACGTACAAAACTGTGCTTCATACAATGTACATTTGTGATTGCTAAGCATACAAATAAGATTATTTATTGATAGATTTGAAACAAGGTCTTGTTGCAGGCGCAGCCGGACTAGATTGTGTGAACGACTCTTGGCGGAATGCTTGACTGCCGCGAGGGAGATCAGCAAGATATTGTTTACGAACTGCAGCAGCCCACCAAAACGATTTTTATCGAGTGTTGGGCAGAGTCAGGCTGTGTATGTTTTGATTCTACAAAGCTGTGTCCATCGAAAAACATTCAATAATCAAATCATTGCATAAATTCTCGCAGAATGCGATCACTGATCAGT
>TU42741
CTTTAGAGGCTAAGGACATTAATAGTATAATGAAAATGTAATGCTCGTAACAGTAGGCATATAGCCAATACACTTAAAAAACGATAATACAATCAAATATAATCTAAAATTATTAGTATTGTCACCATCAGCAATCTTAATAGGCTATGTTCGCAATATCCGTCAAGTGACACACGGCACGGGACTACTGTACGCGCCGCACGCGCTAAAGAGTTCCGTGACACTGACGAACTGTTCAccagcagcaggaggagagggatgagggcagCATGGATTACTCCCTCTCTACTGGGTTAAGATGCTTACCAACTAATTACCTTTCCATCTGAAAATCCCCGACCACGCAGCCCCAACAGACCGAGTGctaggagagatgaagagatagaggGACGGGGAGGCCGGTggtggaaagaggagaggatgggtgtTTGTGTTTCTTTTTTCATTTCAGGAGGAGGATGCTGTCCTTTGGGTGATGTGGCCTTCGTTCAGGTATGGAGCTATTCCTcgaagagggggaggtagggagagagggGTCTATTGACGATTTCTTCCAGAAGCGGGAAGAGGAGCTCTGGGACCCATTTGGAGCATCTCAAAAATCACTTAGTGCATTATTCCACACGGCTGTGATCAATCTTCGAGCTGGGTAGTGGGTCTGCATGGCACAGAGATGAATGTCTGCCCCTTTCTCCATGTCCCGATAAGGGATGTTTGTTGTAACCTGTTTGTTTTAACCCGATGGACAGAAGGCATGTGCAACGCAGCCCATGAGGACATGGATATAAGAAACTTGTTGCGGATTTTAATATTTTAAGTGGTAGTATTGAATacatggctaatgctgtgttgAACGACATGTTGGAACACATTCTTTTAGAACACATAGAGAATAATTATTATCTGTGTAGTGTGGAGTAAGGTCTGGTGTTTAAGTCATGCATTTCATTCAAGCCCTGCCTTTCTGCCCCGTTCATTCCCCTTTTGTGGATCAGAAACAAGGTAGAAGATGTATGCAATAATTTGACTTGAGTTTCTATCATATTTCTCTGACCTATCCAAGTTCACAGGGGCGGGCGGCCTGTCCATCTGGCATTTTGGgtaatgccagatgggctggtcaaTTTTTAGCCCAGTTGGACTGTCTAACTTGTGCCCCTCAAGGAACAAAATGGGCTGGTGTGGGGGCCTCAAAGAAAAAACAGAGTGGCTGTGGTTCTGGATCTTCTGTAACCCGACTTTCTGTTTCTAAAAATGATACGTAGATTTCTGCGGGATCCACTAGCCTACCTCCTTTCAGCTGTTGTTCAGTAATAATGGGAAGTTCTTACCGACTCAGATCTTTTTGACTCAGTCAAAAGAATGAATCAAGCTCGTTCTATTCATTTGATTCAGTAATGCCCAGAGCATGCAGGACCCCTACCGGCGAATGATGAACTAAAAGCTCGAAGGAATCATGATTGCACAAGTCTCTCATTCACCATAGGAGGCTTGTTGGAGCTGCCATTTGTGACTGAAACGTACAAAACTGTGCTTCATACAATGTACATTTGTGATTGCTAAGCATACAAATAAGATTATTTATTGATAGATTTGAAACAAGGTCTTGTTGCAGGCGCAGCCGGACTAGATTGTGTGAACGACTCTTGGCGGAATGCTTGACTGCCGCGAGGGAGATCAGCAAGATATTGTTTACGAACTGCAGCAGCCCACCAAAACGATTTTTATCGAGTGTTGGGCAGAGTCAGGCTGTGTATGTTTTGATTCTACAAAGCTGTGTCCATCGAAAAACATTCAATAATCAAATCATTGCATAAATTCTCGCAGAATGCGATCACTGATCAGT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU42740 False 1803 lncRNA 0.44 2 36266306 36269405
TU42741 True 1846 lncRNA 0.44 2 36266306 36269405

Neighbor

gene id symbol gene type direction distance location
LOC110522068 erc1 coding upstream 35110 36200301 ~ 36231196 (+)
rad52 rad52 coding upstream 125366 36133477 ~ 36140940 (+)
LOC110522059 LOC106573371 coding upstream 149869 36087136 ~ 36116437 (+)
LOC110522113 LOC106573380 coding upstream 327626 35922982 ~ 35938680 (+)
LOC110522073 LOC106573381 coding upstream 374775 35815461 ~ 35891607 (+)
lrrn2 LOC106573362 coding downstream 79649 36349054 ~ 36353251 (+)
LOC110522188 LOC106573360 coding downstream 139984 36409389 ~ 36433684 (+)
rassf7a LOC106573359 coding downstream 172032 36441437 ~ 36511131 (+)
phrf1 LOC106573357 coding downstream 249441 36518846 ~ 36538338 (+)
LOC110522265 LOC106573356 coding downstream 285342 36554747 ~ 36560454 (+)
G37769 NA non-coding upstream 17881 36247676 ~ 36248425 (+)
G37677 NA non-coding upstream 214132 36051581 ~ 36052174 (+)
G37631 lrrc17 non-coding upstream 256446 35976392 ~ 36009860 (+)
G37625 NA non-coding upstream 299827 35966250 ~ 35966479 (+)
G37567 NA non-coding upstream 366650 35886307 ~ 35899656 (+)
G38373 NA non-coding downstream 93738 36363143 ~ 36363405 (+)
G38380 NA non-coding downstream 100695 36370100 ~ 36373326 (+)
G38382 NA non-coding downstream 105538 36374943 ~ 36376043 (+)
G38427 NA non-coding downstream 156204 36425609 ~ 36459705 (+)
G37719 LOC106573365 other upstream 122344 36141073 ~ 36143962 (+)
G37450 NA other upstream 674379 35591390 ~ 35591927 (+)
G38652 NA other downstream 573203 36842608 ~ 36883892 (+)
G40149 LOC100136012 other downstream 1501540 37770945 ~ 37771468 (+)
G40150 NA other downstream 1502249 37771654 ~ 37772145 (+)
LOC110522455 LOC106573334 other downstream 3131758 39401145 ~ 39403331 (+)
LOC110520525 LOC106573323 other downstream 3367483 39636888 ~ 39645220 (+)

Expression


Co-expression Network