G38372



Basic Information


Item Value
gene id G38372
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 36362820 ~ 36363094 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU43402
gttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccaaatactttcgcaaggcactgtatatatattctgcacatctaccattccagtgtttaattgctatattgtaattacttcgccaccatggcctatttattgcctacctccctaatTAAAGCTATATATttatacagatatatatatatatatatatatat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU43402 True 275 lncRNA 0.33 1 36362820 36363094

Neighbor


gene id symbol gene type direction distance location
LOC110522167 LOC106573363 coding downstream 40543 36290706 ~ 36322277 (-)
LOC110522087 NA coding downstream 98714 36261188 ~ 36264106 (-)
LOC110522124 fbxl14 coding downstream 128512 36231487 ~ 36234308 (-)
LOC110522050 LOC106573365 coding downstream 173114 36141051 ~ 36189706 (-)
LOC110522098 LOC106573370 coding downstream 231439 36121670 ~ 36131381 (-)
LOC110522187 LOC106573361 coding upstream 6997 36370091 ~ 36409064 (-)
LOC100750228 irf-7 coding upstream 176703 36539797 ~ 36550002 (-)
LOC118966750 NA coding upstream 277961 36641055 ~ 36641109 (-)
ldlrad3 LOC106573355 coding upstream 349770 36712864 ~ 36827281 (-)
trim44 LOC106573354 coding upstream 521378 36884472 ~ 36952971 (-)
G38370 NA non-coding downstream 405 36362214 ~ 36362415 (-)
G38369 NA non-coding downstream 864 36361686 ~ 36361956 (-)
G38345 NA non-coding downstream 29818 36332159 ~ 36333002 (-)
G38314 NA non-coding downstream 81553 36280348 ~ 36281267 (-)
G38374 NA non-coding upstream 53 36363147 ~ 36363348 (-)
G38875 NA non-coding upstream 131025 36494119 ~ 36502447 (-)
G38881 NA non-coding upstream 135626 36498720 ~ 36499200 (-)
G38917 NA non-coding upstream 211947 36575041 ~ 36576178 (-)
G38992 NA non-coding upstream 341430 36704524 ~ 36710705 (-)
G38045 LOC106573386 other downstream 640764 35721440 ~ 35722056 (-)
G37976 NA other downstream 779212 35583292 ~ 35583608 (-)
G37907 NA other downstream 921492 35440918 ~ 35441328 (-)
G37310 LOC106573403 other downstream 1084815 35273709 ~ 35278005 (-)
G36196 NA other downstream 1981588 34341562 ~ 34381232 (-)
G38855 NA other upstream 145444 36508538 ~ 36510829 (-)
G40079 NA other upstream 1353446 37716540 ~ 37717033 (-)
G40732 NA other upstream 1762186 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 1824394 38187488 ~ 38191736 (-)

Expression



Co-expression Network