Gene
RNA
| Item | Value |
|---|---|
| gene id | G39030 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 36762233 ~ 36789206 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU44114 | True | 216 | lncRNA | 0.36 | 2 | 36762233 | 36789206 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966750 | NA | coding | downstream | 121124 | 36641055 ~ 36641109 (-) |
| LOC100750228 | irf-7 | coding | downstream | 212231 | 36539797 ~ 36550002 (-) |
| LOC110522187 | LOC106573361 | coding | downstream | 353169 | 36370091 ~ 36409064 (-) |
| LOC110522167 | LOC106573363 | coding | downstream | 439956 | 36290706 ~ 36322277 (-) |
| LOC110522087 | NA | coding | downstream | 498127 | 36261188 ~ 36264106 (-) |
| trim44 | LOC106573354 | coding | upstream | 95266 | 36884472 ~ 36952971 (-) |
| LOC110522309 | LOC106573353 | coding | upstream | 239679 | 37028885 ~ 37031653 (-) |
| LOC110522333 | NA | coding | upstream | 423214 | 37212420 ~ 37248824 (-) |
| pdhx | pdhx | coding | upstream | 498350 | 37287556 ~ 37347643 (-) |
| LOC110522348 | LOC106573397 | coding | upstream | 591362 | 37380568 ~ 37397634 (-) |
| G38992 | NA | non-coding | downstream | 51528 | 36704524 ~ 36710705 (-) |
| G38917 | NA | non-coding | downstream | 186055 | 36575041 ~ 36576178 (-) |
| G38875 | NA | non-coding | downstream | 259786 | 36494119 ~ 36502447 (-) |
| G38881 | NA | non-coding | downstream | 263033 | 36498720 ~ 36499200 (-) |
| G38374 | NA | non-coding | downstream | 398885 | 36363147 ~ 36363348 (-) |
| G39158 | NA | non-coding | upstream | 181242 | 36970448 ~ 36970664 (-) |
| G39194 | NA | non-coding | upstream | 210941 | 37000147 ~ 37000468 (-) |
| G39217 | NA | non-coding | upstream | 228086 | 37017292 ~ 37017552 (-) |
| G39231 | NA | non-coding | upstream | 236529 | 37025735 ~ 37026035 (-) |
| G38855 | NA | other | downstream | 251404 | 36508538 ~ 36510829 (-) |
| G38045 | LOC106573386 | other | downstream | 1040177 | 35721440 ~ 35722056 (-) |
| G37976 | NA | other | downstream | 1178625 | 35583292 ~ 35583608 (-) |
| G37907 | NA | other | downstream | 1320905 | 35440918 ~ 35441328 (-) |
| G40079 | NA | other | upstream | 927334 | 37716540 ~ 37717033 (-) |
| G40732 | NA | other | upstream | 1336074 | 38125280 ~ 38125725 (-) |
| G40768 | LOC106573348 | other | upstream | 1398282 | 38187488 ~ 38191736 (-) |
| G41868 | NA | other | upstream | 2232599 | 39021805 ~ 39022025 (-) |
| tspan9a | LOC106573177 | other | upstream | 6249522 | 42852829 ~ 43129052 (-) |
