Gene
RNA
| Item | Value |
|---|---|
| gene id | G38763 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 36957227 ~ 36957548 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU43830 | True | 322 | lncRNA | 0.38 | 1 | 36957227 | 36957548 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522265 | LOC106573356 | coding | upstream | 396773 | 36554747 ~ 36560454 (+) |
| phrf1 | LOC106573357 | coding | upstream | 418889 | 36518846 ~ 36538338 (+) |
| rassf7a | LOC106573359 | coding | upstream | 446096 | 36441437 ~ 36511131 (+) |
| LOC110522188 | LOC106573360 | coding | upstream | 523543 | 36409389 ~ 36433684 (+) |
| lrrn2 | LOC106573362 | coding | upstream | 603976 | 36349054 ~ 36353251 (+) |
| LOC110522315 | LOC106573352 | coding | downstream | 114072 | 37071620 ~ 37129381 (+) |
| LOC110522323 | LOC106573351 | coding | downstream | 195925 | 37153473 ~ 37196648 (+) |
| LOC110522363 | NA | coding | downstream | 836894 | 37794442 ~ 37849251 (+) |
| LOC110522368 | LOC106573348 | coding | downstream | 1086537 | 38044085 ~ 38191930 (+) |
| LOC118964578 | NA | coding | downstream | 1359644 | 38317192 ~ 38319819 (+) |
| G38627 | NA | non-coding | upstream | 107129 | 36788789 ~ 36850098 (+) |
| G38512 | LOC100194703 | non-coding | upstream | 270978 | 36650745 ~ 36686249 (+) |
| G38468 | NA | non-coding | upstream | 374745 | 36549058 ~ 36582482 (+) |
| G38519 | NA | non-coding | upstream | 375394 | 36581396 ~ 36581833 (+) |
| G38470 | NA | non-coding | upstream | 416569 | 36486217 ~ 36540658 (+) |
| G38773 | NA | non-coding | downstream | 14725 | 36972273 ~ 36972557 (+) |
| G39196 | NA | non-coding | downstream | 43855 | 37001403 ~ 37001632 (+) |
| G39204 | NA | non-coding | downstream | 50146 | 37007694 ~ 37007916 (+) |
| G39246 | NA | non-coding | downstream | 84840 | 37042388 ~ 37042610 (+) |
| G39290 | NA | non-coding | downstream | 117320 | 37074868 ~ 37075179 (+) |
| G38652 | NA | other | upstream | 73335 | 36842608 ~ 36883892 (+) |
| G37719 | LOC106573365 | other | upstream | 813265 | 36141073 ~ 36143962 (+) |
| rad52 | rad52 | other | upstream | 821373 | 36133477 ~ 36140940 (+) |
| LOC110522113 | LOC106573380 | other | upstream | 1018560 | 35922982 ~ 35938680 (+) |
| LOC110522073 | LOC106573381 | other | upstream | 1065620 | 35815461 ~ 35891607 (+) |
| G40149 | LOC100136012 | other | downstream | 813397 | 37770945 ~ 37771468 (+) |
| G40150 | NA | other | downstream | 814106 | 37771654 ~ 37772145 (+) |
| LOC110522455 | LOC106573334 | other | downstream | 2443615 | 39401145 ~ 39403331 (+) |
| LOC110520525 | LOC106573323 | other | downstream | 2679340 | 39636888 ~ 39645220 (+) |
| G42208 | NA | other | downstream | 2689990 | 39647538 ~ 39648632 (+) |
