G39196


Basic Information

Item Value
gene id G39196
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 37001403 ~ 37001632 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU44297
ttgtatgctgtagcattaagatttcccttcactagaactaaggggcctagccagaaccatgtaaaacagtcccagactattattcctcctccaccaaactttacagttggaactatgcattcaggcaggtagcgttctcctggcatcaatTAAACCTAGAATCATCCGTCAGACTTCCAAATGGTGAAGTGTGAgtcattactccagagaacacgtttccactgctccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44297 True 230 lncRNA 0.37 1 37001403 37001632

Neighbor

gene id symbol gene type direction distance location
LOC110522265 LOC106573356 coding upstream 440949 36554747 ~ 36560454 (+)
phrf1 LOC106573357 coding upstream 463065 36518846 ~ 36538338 (+)
rassf7a LOC106573359 coding upstream 490272 36441437 ~ 36511131 (+)
LOC110522188 LOC106573360 coding upstream 567719 36409389 ~ 36433684 (+)
lrrn2 LOC106573362 coding upstream 648152 36349054 ~ 36353251 (+)
LOC110522315 LOC106573352 coding downstream 69988 37071620 ~ 37129381 (+)
LOC110522323 LOC106573351 coding downstream 151841 37153473 ~ 37196648 (+)
LOC110522363 NA coding downstream 792810 37794442 ~ 37849251 (+)
LOC110522368 LOC106573348 coding downstream 1042453 38044085 ~ 38191930 (+)
LOC118964578 NA coding downstream 1315560 38317192 ~ 38319819 (+)
G38773 NA non-coding upstream 28846 36972273 ~ 36972557 (+)
G38763 NA non-coding upstream 43855 36957227 ~ 36957548 (+)
G38627 NA non-coding upstream 151305 36788789 ~ 36850098 (+)
G38512 LOC100194703 non-coding upstream 315154 36650745 ~ 36686249 (+)
G38468 NA non-coding upstream 418921 36549058 ~ 36582482 (+)
G39204 NA non-coding downstream 6062 37007694 ~ 37007916 (+)
G39246 NA non-coding downstream 40756 37042388 ~ 37042610 (+)
G39290 NA non-coding downstream 73236 37074868 ~ 37075179 (+)
G39322 NA non-coding downstream 133073 37134705 ~ 37136199 (+)
G39360 NA non-coding downstream 195383 37197015 ~ 37197225 (+)
G38652 NA other upstream 117511 36842608 ~ 36883892 (+)
G37719 LOC106573365 other upstream 857441 36141073 ~ 36143962 (+)
rad52 rad52 other upstream 865549 36133477 ~ 36140940 (+)
LOC110522113 LOC106573380 other upstream 1062736 35922982 ~ 35938680 (+)
LOC110522073 LOC106573381 other upstream 1109796 35815461 ~ 35891607 (+)
G40149 LOC100136012 other downstream 769313 37770945 ~ 37771468 (+)
G40150 NA other downstream 770022 37771654 ~ 37772145 (+)
LOC110522455 LOC106573334 other downstream 2399531 39401145 ~ 39403331 (+)
LOC110520525 LOC106573323 other downstream 2635256 39636888 ~ 39645220 (+)
G42208 NA other downstream 2645906 39647538 ~ 39648632 (+)

Expression


Co-expression Network