G39204


Basic Information

Item Value
gene id G39204
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 37007694 ~ 37007916 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU44305
GGGAGGGTCACACTCTACAAATGTtatagagcatgaacctgcagaaACAAGTCCCTGTTTTGATGTTTGCAGACAgggacagggtgttgtccagggtcacaccaaggttcttttttaaatgcattcttcatttaactaggcaagtcagttaagaacaaattcttatttacaatgacagtctaccagggaacagtgggttaactgccttgtttaggggcataac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106604997, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44305 True 223 lncRNA 0.36 1 37007694 37007916

Neighbor

gene id symbol gene type direction distance location
LOC110522265 LOC106573356 coding upstream 447240 36554747 ~ 36560454 (+)
phrf1 LOC106573357 coding upstream 469356 36518846 ~ 36538338 (+)
rassf7a LOC106573359 coding upstream 496563 36441437 ~ 36511131 (+)
LOC110522188 LOC106573360 coding upstream 574010 36409389 ~ 36433684 (+)
lrrn2 LOC106573362 coding upstream 654443 36349054 ~ 36353251 (+)
LOC110522315 LOC106573352 coding downstream 63704 37071620 ~ 37129381 (+)
LOC110522323 LOC106573351 coding downstream 145557 37153473 ~ 37196648 (+)
LOC110522363 NA coding downstream 786526 37794442 ~ 37849251 (+)
LOC110522368 LOC106573348 coding downstream 1036169 38044085 ~ 38191930 (+)
LOC118964578 NA coding downstream 1309276 38317192 ~ 38319819 (+)
G39196 NA non-coding upstream 6062 37001403 ~ 37001632 (+)
G38773 NA non-coding upstream 35137 36972273 ~ 36972557 (+)
G38763 NA non-coding upstream 50146 36957227 ~ 36957548 (+)
G38627 NA non-coding upstream 157596 36788789 ~ 36850098 (+)
G38512 LOC100194703 non-coding upstream 321445 36650745 ~ 36686249 (+)
G39246 NA non-coding downstream 34472 37042388 ~ 37042610 (+)
G39290 NA non-coding downstream 66952 37074868 ~ 37075179 (+)
G39322 NA non-coding downstream 126789 37134705 ~ 37136199 (+)
G39360 NA non-coding downstream 189099 37197015 ~ 37197225 (+)
G39361 NA non-coding downstream 190097 37198013 ~ 37198480 (+)
G38652 NA other upstream 123802 36842608 ~ 36883892 (+)
G37719 LOC106573365 other upstream 863732 36141073 ~ 36143962 (+)
rad52 rad52 other upstream 871840 36133477 ~ 36140940 (+)
LOC110522113 LOC106573380 other upstream 1069027 35922982 ~ 35938680 (+)
LOC110522073 LOC106573381 other upstream 1116087 35815461 ~ 35891607 (+)
G40149 LOC100136012 other downstream 763029 37770945 ~ 37771468 (+)
G40150 NA other downstream 763738 37771654 ~ 37772145 (+)
LOC110522455 LOC106573334 other downstream 2393247 39401145 ~ 39403331 (+)
LOC110520525 LOC106573323 other downstream 2628972 39636888 ~ 39645220 (+)
G42208 NA other downstream 2639622 39647538 ~ 39648632 (+)

Expression


Co-expression Network