Gene
RNA
| Item | Value |
|---|---|
| gene id | G39282 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 37070468 ~ 37070678 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU44391 | True | 211 | lncRNA | 0.38 | 1 | 37070468 | 37070678 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522309 | LOC106573353 | coding | downstream | 38815 | 37028885 ~ 37031653 (-) |
| trim44 | LOC106573354 | coding | downstream | 117497 | 36884472 ~ 36952971 (-) |
| ldlrad3 | LOC106573355 | coding | downstream | 243187 | 36712864 ~ 36827281 (-) |
| LOC118966750 | NA | coding | downstream | 429359 | 36641055 ~ 36641109 (-) |
| LOC100750228 | irf-7 | coding | downstream | 520466 | 36539797 ~ 36550002 (-) |
| LOC110522333 | NA | coding | upstream | 141742 | 37212420 ~ 37248824 (-) |
| pdhx | pdhx | coding | upstream | 216878 | 37287556 ~ 37347643 (-) |
| LOC110522348 | LOC106573397 | coding | upstream | 309890 | 37380568 ~ 37397634 (-) |
| LOC118966683 | NA | coding | upstream | 600171 | 37670849 ~ 37675533 (-) |
| LOC118966685 | NA | coding | upstream | 605703 | 37676381 ~ 37681639 (-) |
| G39270 | NA | non-coding | downstream | 8448 | 37061816 ~ 37062020 (-) |
| G39240 | NA | non-coding | downstream | 31601 | 37038505 ~ 37038867 (-) |
| G39231 | NA | non-coding | downstream | 44433 | 37025735 ~ 37026035 (-) |
| G39217 | NA | non-coding | downstream | 52916 | 37017292 ~ 37017552 (-) |
| G39194 | NA | non-coding | downstream | 70000 | 37000147 ~ 37000468 (-) |
| G39284 | NA | non-coding | upstream | 197 | 37070875 ~ 37071190 (-) |
| G39495 | NA | non-coding | upstream | 956 | 37071634 ~ 37071882 (-) |
| G39502 | NA | non-coding | upstream | 6733 | 37077411 ~ 37196648 (-) |
| G39572 | NA | non-coding | upstream | 126480 | 37197158 ~ 37197436 (-) |
| G39575 | NA | non-coding | upstream | 128807 | 37199485 ~ 37202357 (-) |
| G38855 | NA | other | downstream | 559639 | 36508538 ~ 36510829 (-) |
| LOC110522187 | LOC106573361 | other | downstream | 661449 | 36370091 ~ 36409064 (-) |
| G38045 | LOC106573386 | other | downstream | 1348412 | 35721440 ~ 35722056 (-) |
| G37976 | NA | other | downstream | 1486860 | 35583292 ~ 35583608 (-) |
| G37907 | NA | other | downstream | 1629140 | 35440918 ~ 35441328 (-) |
| G40079 | NA | other | upstream | 645862 | 37716540 ~ 37717033 (-) |
| G40732 | NA | other | upstream | 1054602 | 38125280 ~ 38125725 (-) |
| G40768 | LOC106573348 | other | upstream | 1116810 | 38187488 ~ 38191736 (-) |
| G41868 | NA | other | upstream | 1951127 | 39021805 ~ 39022025 (-) |
| tspan9a | LOC106573177 | other | upstream | 5968050 | 42852829 ~ 43129052 (-) |
