G39368


Basic Information

Item Value
gene id G39368
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 37210131 ~ 37210560 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU44479
gcgctgtactgcagcgccagctgtgccatcagagtccctgggttcgcgcccaggctctgtcgtaaccggctgtgaccgggaggtccgtggggcgacgcacaattggcctagcgtcgcccgggttagggagggcttggttggtaggggtgtccttgtctcatagcgcaccagcgactcctgtggcgggctgggcgcagtgtgcgctaaccaaggtggccaggtgcacggtgtttcctccggcgcattggtgcggctggcttccgggttggatgcgtgctgtgttaagaagcagtgcggcttggttgggttgtgtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttgtagcgatgagacaagatagtagctacttcaacaattggataccacgaaattggggagaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44479 True 430 lncRNA 0.60 1 37210131 37210560

Neighbor

gene id symbol gene type direction distance location
LOC110522323 LOC106573351 coding upstream 13483 37153473 ~ 37196648 (+)
LOC110522315 LOC106573352 coding upstream 80750 37071620 ~ 37129381 (+)
LOC110522265 LOC106573356 coding upstream 649677 36554747 ~ 36560454 (+)
phrf1 LOC106573357 coding upstream 671793 36518846 ~ 36538338 (+)
rassf7a LOC106573359 coding upstream 699000 36441437 ~ 36511131 (+)
LOC110522363 NA coding downstream 583882 37794442 ~ 37849251 (+)
LOC110522368 LOC106573348 coding downstream 833525 38044085 ~ 38191930 (+)
LOC118964578 NA coding downstream 1106632 38317192 ~ 38319819 (+)
LOC110522396 LOC106573344 coding downstream 1912440 39123000 ~ 39294499 (+)
LOC110522413 LOC106573341 coding downstream 2126581 39337141 ~ 39339608 (+)
G39361 NA non-coding upstream 11651 37198013 ~ 37198480 (+)
G39360 NA non-coding upstream 12906 37197015 ~ 37197225 (+)
G39322 NA non-coding upstream 73932 37134705 ~ 37136199 (+)
G39290 NA non-coding upstream 134952 37074868 ~ 37075179 (+)
G39246 NA non-coding upstream 167521 37042388 ~ 37042610 (+)
G39405 NA non-coding downstream 57303 37267863 ~ 37268118 (+)
G39410 NA non-coding downstream 61918 37272478 ~ 37272743 (+)
G39412 NA non-coding downstream 63419 37273979 ~ 37274227 (+)
G39414 NA non-coding downstream 64887 37275447 ~ 37275662 (+)
G39423 NA non-coding downstream 103287 37313847 ~ 37314663 (+)
G38652 NA other upstream 326239 36842608 ~ 36883892 (+)
G37719 LOC106573365 other upstream 1066169 36141073 ~ 36143962 (+)
rad52 rad52 other upstream 1074277 36133477 ~ 36140940 (+)
LOC110522113 LOC106573380 other upstream 1271464 35922982 ~ 35938680 (+)
LOC110522073 LOC106573381 other upstream 1318524 35815461 ~ 35891607 (+)
G40149 LOC100136012 other downstream 560385 37770945 ~ 37771468 (+)
G40150 NA other downstream 561094 37771654 ~ 37772145 (+)
LOC110522455 LOC106573334 other downstream 2190603 39401145 ~ 39403331 (+)
LOC110520525 LOC106573323 other downstream 2426328 39636888 ~ 39645220 (+)
G42208 NA other downstream 2436978 39647538 ~ 39648632 (+)

Expression


Co-expression Network