Gene
RNA
| Item | Value |
|---|---|
| gene id | G39700 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 37412066 ~ 37412698 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ribosomal protein S6 kinase 2 alpha isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU44830 | True | 503 | lncRNA | 0.50 | 2 | 37412066 | 37412698 |
37,409,200
37,409,600
37,410,000
37,410,400
37,410,800
37,411,200
37,411,600
37,412,000
37,412,400
37,412,800
37,413,200
37,413,600
37,414,000
NC_048565.1
Loading
Loading
Loading
Loading
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522323 | LOC106573351 | coding | upstream | 215418 | 37153473 ~ 37196648 (+) |
| LOC110522315 | LOC106573352 | coding | upstream | 282685 | 37071620 ~ 37129381 (+) |
| LOC110522265 | LOC106573356 | coding | upstream | 851612 | 36554747 ~ 36560454 (+) |
| phrf1 | LOC106573357 | coding | upstream | 873728 | 36518846 ~ 36538338 (+) |
| rassf7a | LOC106573359 | coding | upstream | 900935 | 36441437 ~ 36511131 (+) |
| LOC110522363 | NA | coding | downstream | 381744 | 37794442 ~ 37849251 (+) |
| LOC110522368 | LOC106573348 | coding | downstream | 631387 | 38044085 ~ 38191930 (+) |
| LOC118964578 | NA | coding | downstream | 904494 | 38317192 ~ 38319819 (+) |
| LOC110522396 | LOC106573344 | coding | downstream | 1710302 | 39123000 ~ 39294499 (+) |
| LOC110522413 | LOC106573341 | coding | downstream | 1924443 | 39337141 ~ 39339608 (+) |
| G39699 | NA | non-coding | upstream | 459 | 37411387 ~ 37411607 (+) |
| G39698 | NA | non-coding | upstream | 751 | 37411025 ~ 37411315 (+) |
| G39697 | NA | non-coding | upstream | 4461 | 37407365 ~ 37407605 (+) |
| G39472 | NA | non-coding | upstream | 29174 | 37360082 ~ 37382892 (+) |
| G39423 | NA | non-coding | upstream | 97403 | 37313847 ~ 37314663 (+) |
| G39695 | NA | non-coding | downstream | 103 | 37412801 ~ 37418794 (+) |
| G39710 | NA | non-coding | downstream | 6563 | 37419261 ~ 37419534 (+) |
| G39712 | NA | non-coding | downstream | 7192 | 37419890 ~ 37420152 (+) |
| G39715 | NA | non-coding | downstream | 9514 | 37422212 ~ 37422427 (+) |
| G39778 | NA | non-coding | downstream | 63888 | 37476586 ~ 37476826 (+) |
| G38652 | NA | other | upstream | 528174 | 36842608 ~ 36883892 (+) |
| G37719 | LOC106573365 | other | upstream | 1268104 | 36141073 ~ 36143962 (+) |
| rad52 | rad52 | other | upstream | 1276212 | 36133477 ~ 36140940 (+) |
| LOC110522113 | LOC106573380 | other | upstream | 1473399 | 35922982 ~ 35938680 (+) |
| LOC110522073 | LOC106573381 | other | upstream | 1520459 | 35815461 ~ 35891607 (+) |
| G40149 | LOC100136012 | other | downstream | 358247 | 37770945 ~ 37771468 (+) |
| G40150 | NA | other | downstream | 358956 | 37771654 ~ 37772145 (+) |
| LOC110522455 | LOC106573334 | other | downstream | 1988465 | 39401145 ~ 39403331 (+) |
| LOC110520525 | LOC106573323 | other | downstream | 2224190 | 39636888 ~ 39645220 (+) |
| G42208 | NA | other | downstream | 2234840 | 39647538 ~ 39648632 (+) |
