Gene
RNA
| Item | Value |
|---|---|
| gene id | G39857 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 37533836 ~ 37534058 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposon TX1 hypothetical protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU44989 | True | 223 | lncRNA | 0.47 | 1 | 37533836 | 37534058 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522348 | LOC106573397 | coding | downstream | 136202 | 37380568 ~ 37397634 (-) |
| pdhx | pdhx | coding | downstream | 186193 | 37287556 ~ 37347643 (-) |
| LOC110522333 | NA | coding | downstream | 285012 | 37212420 ~ 37248824 (-) |
| LOC110522309 | LOC106573353 | coding | downstream | 502183 | 37028885 ~ 37031653 (-) |
| trim44 | LOC106573354 | coding | downstream | 580865 | 36884472 ~ 36952971 (-) |
| LOC118966683 | NA | coding | upstream | 136791 | 37670849 ~ 37675533 (-) |
| LOC118966685 | NA | coding | upstream | 142323 | 37676381 ~ 37681639 (-) |
| LOC118966688 | NA | coding | upstream | 148586 | 37682644 ~ 37687745 (-) |
| LOC118966689 | NA | coding | upstream | 154692 | 37688750 ~ 37693851 (-) |
| LOC118964577 | NA | coding | upstream | 527031 | 38061089 ~ 38061663 (-) |
| G39856 | NA | non-coding | downstream | 839 | 37532552 ~ 37532997 (-) |
| G39849 | NA | non-coding | downstream | 7433 | 37525861 ~ 37526403 (-) |
| G39847 | NA | non-coding | downstream | 9247 | 37524369 ~ 37524589 (-) |
| G39845 | NA | non-coding | downstream | 10119 | 37523458 ~ 37523717 (-) |
| G39843 | NA | non-coding | downstream | 11126 | 37522462 ~ 37522710 (-) |
| G39904 | NA | non-coding | upstream | 37464 | 37571522 ~ 37571860 (-) |
| G40049 | NA | non-coding | upstream | 151496 | 37685554 ~ 37691937 (-) |
| G40063 | NA | non-coding | upstream | 169721 | 37703779 ~ 37704012 (-) |
| G40086 | NA | non-coding | upstream | 187889 | 37721947 ~ 37722176 (-) |
| G38855 | NA | other | downstream | 1023007 | 36508538 ~ 36510829 (-) |
| LOC110522187 | LOC106573361 | other | downstream | 1124817 | 36370091 ~ 36409064 (-) |
| G38045 | LOC106573386 | other | downstream | 1811780 | 35721440 ~ 35722056 (-) |
| G37976 | NA | other | downstream | 1950228 | 35583292 ~ 35583608 (-) |
| G37907 | NA | other | downstream | 2092508 | 35440918 ~ 35441328 (-) |
| G40079 | NA | other | upstream | 182482 | 37716540 ~ 37717033 (-) |
| G40732 | NA | other | upstream | 591222 | 38125280 ~ 38125725 (-) |
| G40768 | LOC106573348 | other | upstream | 653430 | 38187488 ~ 38191736 (-) |
| G41868 | NA | other | upstream | 1487747 | 39021805 ~ 39022025 (-) |
| tspan9a | LOC106573177 | other | upstream | 5504670 | 42852829 ~ 43129052 (-) |
