G40133



Basic Information


Item Value
gene id G40133
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 37757196 ~ 37757454 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU45268
ctataaatattcacttacctttgaatatcttcatcagaaggcagttccaggaatcccagttcgaccataaatgactgatttgttccataaagttccaaaaAGCACATaatttagccacttgttgttagcttgtTCAGCACAGCATTCAATCCTCAAAAAGCACGAGCAattcctccagacaaaaactcaaaacgttccgttacaggtcgtataaacaagtcaaatgatgtatgcaatccatatttaggatgttttaaac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU45268 True 259 lncRNA 0.35 1 37757196 37757454

Neighbor


gene id symbol gene type direction distance location
LOC118966689 NA coding downstream 63345 37688750 ~ 37693851 (-)
LOC118966688 NA coding downstream 69451 37682644 ~ 37687745 (-)
LOC118966685 NA coding downstream 75557 37676381 ~ 37681639 (-)
LOC118966683 NA coding downstream 81663 37670849 ~ 37675533 (-)
LOC110522348 LOC106573397 coding downstream 359562 37380568 ~ 37397634 (-)
LOC118964577 NA coding upstream 303635 38061089 ~ 38061663 (-)
LOC118964575 NA coding upstream 308505 38065959 ~ 38066761 (-)
LOC110520456 NA coding upstream 1257621 39015075 ~ 39019091 (-)
LOC110522389 LOC106573347 coding upstream 1323549 39081003 ~ 39084318 (-)
LOC118966691 LOC106573346 coding upstream 1343371 39100825 ~ 39115097 (-)
G40086 NA non-coding downstream 35020 37721947 ~ 37722176 (-)
G40063 NA non-coding downstream 53184 37703779 ~ 37704012 (-)
G40049 NA non-coding downstream 65259 37685554 ~ 37691937 (-)
G39904 NA non-coding downstream 185336 37571522 ~ 37571860 (-)
G40151 NA non-coding upstream 13531 37770985 ~ 37771257 (-)
G40160 NA non-coding upstream 19102 37776556 ~ 37776770 (-)
G40163 NA non-coding upstream 21101 37778555 ~ 37778860 (-)
G40166 NA non-coding upstream 23845 37781299 ~ 37781538 (-)
G40382 NA non-coding upstream 89487 37846941 ~ 37849317 (-)
G40079 NA other downstream 40163 37716540 ~ 37717033 (-)
G38855 NA other downstream 1246367 36508538 ~ 36510829 (-)
LOC110522187 LOC106573361 other downstream 1348177 36370091 ~ 36409064 (-)
G38045 LOC106573386 other downstream 2035140 35721440 ~ 35722056 (-)
G37976 NA other downstream 2173588 35583292 ~ 35583608 (-)
G40732 NA other upstream 367826 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 430034 38187488 ~ 38191736 (-)
G41868 NA other upstream 1264351 39021805 ~ 39022025 (-)
tspan9a LOC106573177 other upstream 5281274 42852829 ~ 43129052 (-)
G49774 NA other upstream 7963351 45720805 ~ 45721124 (-)

Expression



Co-expression Network