G40769



Basic Information


Item Value
gene id G40769
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 38192100 ~ 38192367 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU45925
gtgtgcgttctctaattctctccttctctctttctctctctcggaggacctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctggctgtgctgctgctccagtttcaactgctctgccttattattattcgaccatgctgatcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccatcccacatatgctctctc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU45925 True 268 lncRNA 0.50 1 38192100 38192367

Neighbor


gene id symbol gene type direction distance location
LOC118964575 NA coding downstream 125495 38065959 ~ 38066761 (-)
LOC118964577 NA coding downstream 130437 38061089 ~ 38061663 (-)
LOC118966689 NA coding downstream 498249 37688750 ~ 37693851 (-)
LOC118966688 NA coding downstream 504355 37682644 ~ 37687745 (-)
LOC118966685 NA coding downstream 510461 37676381 ~ 37681639 (-)
LOC110520456 NA coding upstream 822708 39015075 ~ 39019091 (-)
LOC110522389 LOC106573347 coding upstream 888636 39081003 ~ 39084318 (-)
LOC118966691 LOC106573346 coding upstream 908458 39100825 ~ 39115097 (-)
man2a2 man2a2 coding upstream 1122685 39315052 ~ 39336325 (-)
kip1 kip1 coding upstream 1164766 39357133 ~ 39359660 (-)
G40683 NA non-coding downstream 125801 38061165 ~ 38066299 (-)
G40680 NA non-coding downstream 133746 38058130 ~ 38058354 (-)
G40679 NA non-coding downstream 134316 38057553 ~ 38057784 (-)
G40531 NA non-coding downstream 167100 38024756 ~ 38025000 (-)
G40770 NA non-coding upstream 295 38192662 ~ 38193071 (-)
G40767 NA non-coding upstream 1838 38194205 ~ 38195330 (-)
G40771 NA non-coding upstream 4073 38196440 ~ 38196678 (-)
G40776 NA non-coding upstream 10446 38202813 ~ 38203070 (-)
G40788 NA non-coding upstream 28080 38220447 ~ 38220779 (-)
G40768 LOC106573348 other downstream 364 38187488 ~ 38191736 (-)
G40732 NA other downstream 66375 38125280 ~ 38125725 (-)
G40079 NA other downstream 475067 37716540 ~ 37717033 (-)
G38855 NA other downstream 1681271 36508538 ~ 36510829 (-)
LOC110522187 LOC106573361 other downstream 1783081 36370091 ~ 36409064 (-)
G41868 NA other upstream 829438 39021805 ~ 39022025 (-)
tspan9a LOC106573177 other upstream 4846361 42852829 ~ 43129052 (-)
G49774 NA other upstream 7528438 45720805 ~ 45721124 (-)
G49962 NA other upstream 7756591 45948958 ~ 45949951 (-)
G51214 NA other upstream 8872407 47064774 ~ 47236625 (-)

Expression



Co-expression Network