G40767



Basic Information


Item Value
gene id G40767
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 38194205 ~ 38195330 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU45923
AAACTCCTGGTTTATAATCGAtcttcatatatttttttaaggtcATGAAAGTATGCTAACATGAAAATCAATGTCTTACTATTTTAcagtatgtttctatttttcacTTTAATAAACAGGTTGTTGGCacatgtaaaataaaaatgtaaaacgtttttattttttatttttattttaaaaatgtgtttttttagaAATCTACCACTAGAACAGTATTCCTTCTCAGAGAAAATAATGTGGAACTAAAAGCATCTTGTCCCTCCTACCCAACCAAAACATTGAGATACAATACATAAAGAATGAGATAGATTTACTAAATTGCAATAAATGCACCATCATAAAAGTCTCCAAATGATTTACCAACCAAAGGAAAGAAGGGATGATGGACAAACTCTCTTACTTAAAAATTTGAGATCCAGATCCCACTATGATCACCCCAAACACATCGTCAATGACTCACAACAGAGATGGTTTACGTCTGTGCTAAACTCCATGTAAACATCTTTAGTTATTGTATTGGCAGAGATGCCACACTGATGAACATGTTTGTTTCATGTTGACTAAAACTGTGTTGAAGAAGCTCATGTAAGATGGAGTTACCTGAATTATAATTAGGTCATAACGTGCCACATGACATTAAAATAAGTTATTCATTCATCTTTGAGGATTTAGTCTTTCTGTCCAAGTATAGAGTAGAAGTGACGTTTAAAACTGATGACGGGATTTGTCTATTCCCCGATTCTGCATCCTTTACTGTCTGGGTTTAAGTGGAAAAGCAACAAGGGTGACGCTACATATCATTATAATCTGTGACAACCTCCATACTCTGCTGTTTAATACTAAACACTGGTCAAGTGCAAGGGGATGAAATGCTACTACATCACTGTAAGCATATTGTTTCATAGTTGAGGTGCATTTCAAATAACACTATCCACAGACATACCATTTTCAATTGACTCTGAATAATGTTAAAGCATCTAGCTAGCCAATGGGAGCTCTGATAAGCAGAAAGGCATGCGCTAAGGTCATGGTTTCCATGGTGACTGAATCAGCCCACTCCTGTATTTGACATCATATCATTAATAGTGCTTCCTCCCAGAAAATAACTAGATGACATCTGTGTACC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU45923 True 1126 lncRNA 0.35 1 38194205 38195330

Neighbor


gene id symbol gene type direction distance location
LOC118964575 NA coding downstream 127600 38065959 ~ 38066761 (-)
LOC118964577 NA coding downstream 132542 38061089 ~ 38061663 (-)
LOC118966689 NA coding downstream 500354 37688750 ~ 37693851 (-)
LOC118966688 NA coding downstream 506460 37682644 ~ 37687745 (-)
LOC118966685 NA coding downstream 512566 37676381 ~ 37681639 (-)
LOC110520456 NA coding upstream 819745 39015075 ~ 39019091 (-)
LOC110522389 LOC106573347 coding upstream 885673 39081003 ~ 39084318 (-)
LOC118966691 LOC106573346 coding upstream 905495 39100825 ~ 39115097 (-)
man2a2 man2a2 coding upstream 1119722 39315052 ~ 39336325 (-)
kip1 kip1 coding upstream 1161803 39357133 ~ 39359660 (-)
G40770 NA non-coding downstream 1134 38192662 ~ 38193071 (-)
G40769 NA non-coding downstream 1838 38192100 ~ 38192367 (-)
G40683 NA non-coding downstream 127906 38061165 ~ 38066299 (-)
G40680 NA non-coding downstream 135851 38058130 ~ 38058354 (-)
G40771 NA non-coding upstream 1110 38196440 ~ 38196678 (-)
G40776 NA non-coding upstream 7483 38202813 ~ 38203070 (-)
G40788 NA non-coding upstream 25117 38220447 ~ 38220779 (-)
G40789 NA non-coding upstream 26073 38221403 ~ 38221646 (-)
G40804 NA non-coding upstream 40416 38235746 ~ 38236020 (-)
G40768 LOC106573348 other downstream 2469 38187488 ~ 38191736 (-)
G40732 NA other downstream 68480 38125280 ~ 38125725 (-)
G40079 NA other downstream 477172 37716540 ~ 37717033 (-)
G38855 NA other downstream 1683376 36508538 ~ 36510829 (-)
LOC110522187 LOC106573361 other downstream 1785186 36370091 ~ 36409064 (-)
G41868 NA other upstream 826475 39021805 ~ 39022025 (-)
tspan9a LOC106573177 other upstream 4843398 42852829 ~ 43129052 (-)
G49774 NA other upstream 7525475 45720805 ~ 45721124 (-)
G49962 NA other upstream 7753628 45948958 ~ 45949951 (-)
G51214 NA other upstream 8869444 47064774 ~ 47236625 (-)

Expression



Co-expression Network