G40771



Basic Information


Item Value
gene id G40771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 38196440 ~ 38196678 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU45927
ccttattgcccagcgacagccccgaaacctgaaggatctggagaaggtctgtatggaggagtgggccaaaatcccagctgcagtgtgtgcaaacctggtcaagaactacaggaaacgtatgatctctgtaattgcgaacaaaggtttctgtaccaaatattatgctctgcttttctgatgtatcaaatacttatgtcatgcaataaaatgcacactaattacttaaaaatcatacaatg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU45927 True 239 lncRNA 0.45 1 38196440 38196678

Neighbor


gene id symbol gene type direction distance location
LOC118964575 NA coding downstream 129835 38065959 ~ 38066761 (-)
LOC118964577 NA coding downstream 134777 38061089 ~ 38061663 (-)
LOC118966689 NA coding downstream 502589 37688750 ~ 37693851 (-)
LOC118966688 NA coding downstream 508695 37682644 ~ 37687745 (-)
LOC118966685 NA coding downstream 514801 37676381 ~ 37681639 (-)
LOC110520456 NA coding upstream 818397 39015075 ~ 39019091 (-)
LOC110522389 LOC106573347 coding upstream 884325 39081003 ~ 39084318 (-)
LOC118966691 LOC106573346 coding upstream 904147 39100825 ~ 39115097 (-)
man2a2 man2a2 coding upstream 1118374 39315052 ~ 39336325 (-)
kip1 kip1 coding upstream 1160455 39357133 ~ 39359660 (-)
G40767 NA non-coding downstream 1110 38194205 ~ 38195330 (-)
G40770 NA non-coding downstream 3369 38192662 ~ 38193071 (-)
G40769 NA non-coding downstream 4073 38192100 ~ 38192367 (-)
G40683 NA non-coding downstream 130141 38061165 ~ 38066299 (-)
G40776 NA non-coding upstream 6135 38202813 ~ 38203070 (-)
G40788 NA non-coding upstream 23769 38220447 ~ 38220779 (-)
G40789 NA non-coding upstream 24725 38221403 ~ 38221646 (-)
G40804 NA non-coding upstream 39068 38235746 ~ 38236020 (-)
G40835 NA non-coding upstream 65539 38262217 ~ 38262466 (-)
G40768 LOC106573348 other downstream 4704 38187488 ~ 38191736 (-)
G40732 NA other downstream 70715 38125280 ~ 38125725 (-)
G40079 NA other downstream 479407 37716540 ~ 37717033 (-)
G38855 NA other downstream 1685611 36508538 ~ 36510829 (-)
LOC110522187 LOC106573361 other downstream 1787421 36370091 ~ 36409064 (-)
G41868 NA other upstream 825127 39021805 ~ 39022025 (-)
tspan9a LOC106573177 other upstream 4842050 42852829 ~ 43129052 (-)
G49774 NA other upstream 7524127 45720805 ~ 45721124 (-)
G49962 NA other upstream 7752280 45948958 ~ 45949951 (-)
G51214 NA other upstream 8868096 47064774 ~ 47236625 (-)

Expression



Co-expression Network