G45870


Basic Information

Item Value
gene id G45870
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 42891218 ~ 42891593 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU51377
tgtgtgtgtgtgtgtgtgtgtgtgcgtgagagagagagagagagatcataacTCACACTCAGAAGCAGGCACTTGTTCTCCTTGATGGCGCCCAGGCAGCCCAGGAAGCCGGTCACCATGACGATGGCGCCGATGGCGATGACCAAGTTGGCAGCGGAGAGCGACGGGAAGGAGGGCGAGAAGGTGGCAAAGCTGCCCTGGGACACAGACAGCCAGATGCCCACGCCGAGCAGCCCACAGCCACACAACTGCAAAGCAAGAGATCAGAAGAGAGGAAACCAGGTAAGTCAGGTAGGAAATACTCATCACAAAGAAATATCTGTTCAGGATGAATTGGAGTCGGCAGAAATCATGCCATCCAATGCTTCCACAGTTT

Function

NR:

description
PREDICTED: tetraspanin-9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51377 True 376 TUCP 0.47 1 42891218 42891593

Neighbor

gene id symbol gene type direction distance location
ttc38 ttc38 coding upstream 53114 42818090 ~ 42838104 (+)
LOC110523110 LOC106573174 coding upstream 75509 42677127 ~ 42815709 (+)
si:ch211-1e14.1 LOC106573269 coding upstream 234123 42565590 ~ 42657095 (+)
LOC110532326 LOC106573173 coding upstream 326492 42461938 ~ 42564726 (+)
LOC118964613 LOC106573172 coding upstream 558375 42332148 ~ 42332843 (+)
LOC118964622 NA coding downstream 122956 43014549 ~ 43017894 (+)
LOC110523264 LOC106573178 coding downstream 344899 43236492 ~ 43278286 (+)
tmtc2b LOC106573180 coding downstream 563462 43455055 ~ 43634193 (+)
LOC110520672 LOC106573273 coding downstream 915453 43807046 ~ 43809761 (+)
bicd1a LOC106573182 coding downstream 930478 43822071 ~ 43918842 (+)
G45866 NA non-coding upstream 8317 42882627 ~ 42882901 (+)
G45864 NA non-coding upstream 11051 42879858 ~ 42880167 (+)
G45857 NA non-coding upstream 17021 42873994 ~ 42874197 (+)
G45854 NA non-coding upstream 21460 42869552 ~ 42869758 (+)
G45850 NA non-coding upstream 25151 42865374 ~ 42866067 (+)
G45874 NA non-coding downstream 2362 42893955 ~ 42894186 (+)
G45882 NA non-coding downstream 13956 42905549 ~ 42905807 (+)
G45883 NA non-coding downstream 16658 42908251 ~ 42908478 (+)
G45891 NA non-coding downstream 28009 42919602 ~ 42919830 (+)
G45954 NA non-coding downstream 141329 43032922 ~ 43033174 (+)
LOC110522826 LOC106573295 other upstream 1598314 41282901 ~ 41292913 (+)
G43922 LOC106600457 other upstream 1961742 40925492 ~ 40929476 (+)
LOC110522691 NA other upstream 2137116 40745740 ~ 40754201 (+)
G43352 NA other upstream 2685513 40205286 ~ 40205705 (+)
G43208 NA other upstream 2790046 40100453 ~ 40101172 (+)
G47212 NA other downstream 720837 43612430 ~ 43613054 (+)
G47467 NA other downstream 910920 43802513 ~ 43802963 (+)
G47595 NA other downstream 1153077 44044670 ~ 44048011 (+)
G47667 LOC106573189 other downstream 1247498 44139091 ~ 44143716 (+)
e2f4 LOC106573204 other downstream 1829112 44720664 ~ 44748569 (+)

Expression


Co-expression Network