G47910 (LOC106573211)


Basic Information

Item Value
gene id G47910
gene name LOC106573211
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 44789630 ~ 44791090 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU53576
tTCCTTGCTGGGCTCACACTCCTTGGTGAGCTCCACCATGCCCAGCAGCCCCCAGTCTGTGATCTCCTTGCACCAGCCCAGTCGCAGCACCACCAGCCCGGGCAGGTAGGTGGCGATAGCGCGCACGCTCAGGTCTGTGAGGTAGACGCAGGAGGTGAGGTCCAGCTCCCGCAAACTGGAGCCCAGCAGCCGAGCCAGAGAGAACACAGCCAGAtctctgatATAGGTGCAGCTCTTGAAGCTGAGTGTCTCCAACCGTGCCCTGGGCTCCAGGGCAGAGAGCCCTTTCACTATCTCAGCCCCACTGACATGCAGGCACTCAGACAGATCCAGGTTCCTCAGCTCCGGCAGCATCATCAGGTCGGCCAGCCCTTTATCCGTCATCCTCCAGTCccgggacagagagaggaaccggAGGCCCTTCAGGCTCAGGGCCACAGCCAGTACAGCCCGGCTGGTGAGCTCTGTACAGGCGCTGAGGTCCAGGATCCGGAGGCCAGGCTGGTGCTTGCAGAGCACCTCCACAGAGTAGTCTGTCAGCTCCTTGCAGCCCCGCAGACGCAGCTCCTCTAGAGACAGGCCCCCTACCTGGGCCACGGAGCGCAGCGACTCTGGGGTGATGCTAGTTCTGCTCAGGTCCAGCCCCCGCACGGTGGAGGCCTGCTCCTGCAGCAACCTGCGGAGGTTACGTAGGGAGAGCAGGGCAGAGGAGTCAGGCCCCACGGGGCAGCCACGGTACGGGTCAAACTCAAAGGCGATGTGGCAGCCGGCCAGGGAGAGACGGCGAAGTCTGAGAGTGCAGCCTGTGAGTCGGTTGAAGGTGAGATCTGATAGATAGCGCAGGTCAGAGAGATCCAGCTCCTCAAGACCTGCTAAAGCTACCCCCACcatcatcatctccagCCTACAGGGTCTGTCTGACCTGCTGGCGGTGCTCTTCTTTGGACAGGAAGGCTCCAGACATGAAGAGGCTGTCCAGGCCACGGAGGTCAAGCCTGCGCAGGGCGGTCAGGTGGGGCAGCAGGGCCAGGAGGGAAGACTCGGTCACGCTGCTTCCTGGCAGGGCCAGGCTCTCCAGCCGAGGGCCTAGATGGAGCCCTATCTCCTGAAGCACAGCCCGGGACATACTGGACCCATCCAGATGGCTTATGACCAGGCTGCAGCGGGAACGCCTACTCAGGCCCCGGATCAGATCCAGGGAGGAGATAGAGGCTGGGAACTTGAAGGTGTC

Function

NR:

description
F-box/LRR-repeat protein 14-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53576 True 1231 TUCP 0.45 3 44789630 44791090

Neighbor

gene id symbol gene type direction distance location
LOC110523610 LOC106573209 coding upstream 2563 44749758 ~ 44787067 (+)
e2f4 LOC106573204 coding upstream 41061 44720664 ~ 44748569 (+)
cnot1 LOC106573200 coding upstream 107674 44663927 ~ 44681956 (+)
kdm7ab LOC106573199 coding upstream 142209 44598632 ~ 44647421 (+)
LOC118964638 NA coding upstream 321171 44456457 ~ 44468459 (+)
vac14 vac14 coding downstream 65818 44856908 ~ 44886958 (+)
trnag-gcc NA coding downstream 77980 44869070 ~ 44869140 (+)
galnt18a LOC106573212 coding downstream 170111 44961201 ~ 45062434 (+)
LOC110523657 NA coding downstream 280878 45071354 ~ 45072433 (+)
LOC110523687 LOC106573214 coding downstream 301892 45092982 ~ 45115348 (+)
G47980 NA non-coding upstream 13084 44774836 ~ 44776546 (+)
G47906 NA non-coding upstream 75796 44712220 ~ 44713834 (+)
G47926 NA non-coding upstream 100832 44688444 ~ 44688798 (+)
G47925 NA non-coding upstream 101615 44687816 ~ 44688015 (+)
G47922 NA non-coding upstream 105942 44683327 ~ 44683688 (+)
G47984 NA non-coding downstream 1756 44792846 ~ 44793104 (+)
G48005 NA non-coding downstream 48978 44840068 ~ 44840557 (+)
G48010 NA non-coding downstream 54029 44845119 ~ 44845375 (+)
G48033 NA non-coding downstream 111463 44902553 ~ 44902790 (+)
G48035 NA non-coding downstream 114715 44905805 ~ 44906024 (+)
G47667 LOC106573189 other upstream 645914 44139091 ~ 44143716 (+)
G47595 NA other upstream 741619 44044670 ~ 44048011 (+)
G47467 NA other upstream 986667 43802513 ~ 43802963 (+)
G47212 NA other upstream 1176576 43612430 ~ 43613054 (+)
G48976 NA other downstream 354188 45145278 ~ 45146640 (+)
G49142 NA other downstream 623616 45414706 ~ 45418180 (+)
G49335 LOC106573225 other downstream 943963 45730241 ~ 45736780 (+)
G50010 LOC106573227 other downstream 1201183 45992273 ~ 45992891 (+)

Expression


Co-expression Network