Gene
RNA
| Item | Value |
|---|---|
| gene id | G48779 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 44902783 ~ 44903105 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU54501 | True | 323 | lncRNA | 0.38 | 1 | 44902783 | 44903105 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520774 | NA | coding | downstream | 1172 | 44900676 ~ 44901611 (-) |
| mmp15a | LOC106573210 | coding | downstream | 67297 | 44821497 ~ 44835486 (-) |
| LOC118960022 | LOC106573206 | coding | downstream | 85242 | 44816985 ~ 44817541 (-) |
| LOC110523630 | LOC106561447 | coding | downstream | 92403 | 44793384 ~ 44810380 (-) |
| lrrc29 | LOC106573211 | coding | downstream | 109951 | 44787137 ~ 44792832 (-) |
| LOC110523666 | LOC106573213 | coding | upstream | 212798 | 45115903 ~ 45142315 (-) |
| LOC110523718 | LOC106573216 | coding | upstream | 346909 | 45250014 ~ 45256049 (-) |
| LOC110523724 | LOC106573217 | coding | upstream | 354131 | 45257236 ~ 45299871 (-) |
| parvaa | LOC106573218 | coding | upstream | 401533 | 45304638 ~ 45321671 (-) |
| LOC110523755 | NA | coding | upstream | 422804 | 45325909 ~ 45414664 (-) |
| G48746 | NA | non-coding | downstream | 42793 | 44859721 ~ 44859990 (-) |
| G48738 | NA | non-coding | downstream | 62229 | 44840228 ~ 44840554 (-) |
| G48736 | NA | non-coding | downstream | 63924 | 44837476 ~ 44838859 (-) |
| G48728 | NA | non-coding | downstream | 73797 | 44828366 ~ 44828986 (-) |
| G48715 | LOC106561448 | non-coding | downstream | 129793 | 44772501 ~ 44772990 (-) |
| G48894 | NA | non-coding | upstream | 159550 | 45062655 ~ 45062876 (-) |
| G48907 | NA | non-coding | upstream | 166319 | 45069424 ~ 45069679 (-) |
| G49489 | NA | non-coding | upstream | 295501 | 45198606 ~ 45198941 (-) |
| G49510 | NA | non-coding | upstream | 317562 | 45220667 ~ 45220919 (-) |
| tspan9a | LOC106573177 | other | downstream | 1773754 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 5880758 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 6711047 | 38187488 ~ 38191736 (-) |
| G40732 | NA | other | downstream | 6777058 | 38125280 ~ 38125725 (-) |
| G40079 | NA | other | downstream | 7185750 | 37716540 ~ 37717033 (-) |
| G49774 | NA | other | upstream | 817700 | 45720805 ~ 45721124 (-) |
| G49962 | NA | other | upstream | 1045853 | 45948958 ~ 45949951 (-) |
| G51214 | NA | other | upstream | 2161669 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 2385834 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 2474536 | 47377641 ~ 47378543 (-) |
