Gene
RNA
| Item | Value |
|---|---|
| gene id | G49510 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 45220667 ~ 45220919 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: aspartate aminotransferase, cytoplasmic-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU55312 | True | 253 | lncRNA | 0.58 | 1 | 45220667 | 45220919 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523666 | LOC106573213 | coding | downstream | 78352 | 45115903 ~ 45142315 (-) |
| LOC110520774 | NA | coding | downstream | 319056 | 44900676 ~ 44901611 (-) |
| mmp15a | LOC106573210 | coding | downstream | 385181 | 44821497 ~ 44835486 (-) |
| LOC118960022 | LOC106573206 | coding | downstream | 403126 | 44816985 ~ 44817541 (-) |
| LOC110523630 | LOC106561447 | coding | downstream | 410287 | 44793384 ~ 44810380 (-) |
| LOC110523718 | LOC106573216 | coding | upstream | 29095 | 45250014 ~ 45256049 (-) |
| LOC110523724 | LOC106573217 | coding | upstream | 36317 | 45257236 ~ 45299871 (-) |
| parvaa | LOC106573218 | coding | upstream | 83719 | 45304638 ~ 45321671 (-) |
| LOC110523755 | NA | coding | upstream | 104990 | 45325909 ~ 45414664 (-) |
| LOC118964648 | NA | coding | upstream | 255734 | 45476653 ~ 45477841 (-) |
| G49489 | NA | non-coding | downstream | 21726 | 45198606 ~ 45198941 (-) |
| G48907 | NA | non-coding | downstream | 150988 | 45069424 ~ 45069679 (-) |
| G48894 | NA | non-coding | downstream | 157791 | 45062655 ~ 45062876 (-) |
| G48779 | NA | non-coding | downstream | 317562 | 44902783 ~ 44903105 (-) |
| G49524 | NA | non-coding | upstream | 22854 | 45243773 ~ 45243993 (-) |
| G49456 | NA | non-coding | upstream | 102286 | 45323205 ~ 45324572 (-) |
| G49555 | NA | non-coding | upstream | 117936 | 45338855 ~ 45339150 (-) |
| G49556 | NA | non-coding | upstream | 118306 | 45339225 ~ 45359551 (-) |
| tspan9a | LOC106573177 | other | downstream | 2091638 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 6198642 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 7028931 | 38187488 ~ 38191736 (-) |
| G40732 | NA | other | downstream | 7094942 | 38125280 ~ 38125725 (-) |
| G40079 | NA | other | downstream | 7503634 | 37716540 ~ 37717033 (-) |
| G49774 | NA | other | upstream | 499886 | 45720805 ~ 45721124 (-) |
| G49962 | NA | other | upstream | 728039 | 45948958 ~ 45949951 (-) |
| G51214 | NA | other | upstream | 1843855 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 2068020 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 2156722 | 47377641 ~ 47378543 (-) |
