G49142


Basic Information

Item Value
gene id G49142
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 45414706 ~ 45418180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU54914
AAACGAATCCTCGGATCAACTGTGAGCAACTTTCTCCCTatccacagatgatgctatctctattgcactcaacactgccctttccaacttggaaaaaaggaacacctacgtgagaatgctacattgactacagctcagcgtccaacaccatagagccctcaaagctcatcactaagctaaggaccctgggactgaacacctccctctgcaactggatcctggatttcctgatgatctgcccccaggtggtaagggcacgacttcaacaccatcattaagtttgctgacgacacaacagtggtaggcctgatcccagACAACAaggagacaacctatagggaggaggtcagagacctggccatgtggtaccaggataacaacctctccctcaacatgatcaagacaaaggtgatgattgtggactacaggaaaaggaggacagagtacgcccccattctcatagaCGGGGCCTGGTATGGCAGTGATgcccctccatcccctcttttacgctgctgctagtcTCTGGTTATTATCtaggcatagtcactttaactccacctacctgtacatattacctcaattacctcgactaacctgtgcccctgcacattgactctgtaccggtaccccctgtatatagcctccctactaatattttactgctgctctttaaatattttatttttttattttttacttttctattttttactaAACACTTATTattcttaaaactacattgttggttaagagcttgtaagtaagctgtgaaggctacctgtgtcctgcataacttcatgaggatggacagGAGGGGATCTGCAGGAGGGGTTCTGCAGCTCAAGTCTGCTGCTCTGCAGGATGTTTCAAGGATGGAGTTTCCAACAACTCAGCAAGAGGAAATCCGTGTGCAGGAGATCTTCACCTCCTACTTCTTCGAAGagggtgctgttccctggcaacaccatagactacactatgcacaaccaagGGCTCTTTTAAGAGTCATTGACATTGCATTAAGAGTATTCTTCTATTTACTTAGCTATGTTAACTGCAGTTATTCAATTcccagtttctctctctttgaatcctacttctcaggtgagggtactgtttaggtaagggtgtgacgtctgtacaaaaacaaaacGGTCTATTTTAAATAATCCATATTGAAAAAATTGAGAACAATTCGACACCCTATAaaccacacctacacactcatgtATCAATCTGATTGATGAACTGACTGTGTTGTGCAGTAAGCAGACTTGACTGTATAACTGTGGCTCTGTACACCTTCaaagaataggcaagagggcAACCATGGGGAATAATAAGACACTTTATTATTTCTATAACTACGCTATAATGTTTGTCCTCGTGTGTTCGTTCATGTTTTTCAGCATAGAGTACTCTGCAGCCAATTAGTGTGGTGTGTTCACACCACACTGATTCCTGTTGAACATTTTCTCAATAAcggtctctctccttcacttcatccctcttctccctaaatccttTAGTTTATATCAGCTGTGTCGGGGAACCCCTCCTGCATCTGAGCTGGCTACATAGAGGGCACTTGgtcaggtcaacaggaagtattattaaagagatgcttcaCATTGGGATTACATTTATGcatgtatttataacacttgataatgaacttctttcaataaagcgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54914 True 1694 TUCP 0.43 3 45414706 45418180

Neighbor

gene id symbol gene type direction distance location
LOC110523687 LOC106573214 coding upstream 299358 45092982 ~ 45115348 (+)
LOC110523657 NA coding upstream 342273 45071354 ~ 45072433 (+)
galnt18a LOC106573212 coding upstream 352272 44961201 ~ 45062434 (+)
vac14 vac14 coding upstream 527748 44856908 ~ 44886958 (+)
LOC110523812 facr1 coding downstream 9490 45427670 ~ 45446413 (+)
LOC118964647 NA coding downstream 33856 45452036 ~ 45454827 (+)
LOC110523825 LOC106573223 coding downstream 48316 45466496 ~ 45471513 (+)
wt-t1a wt-t1a coding downstream 723826 46142006 ~ 46159522 (+)
LOC110523948 LOC106573232 coding downstream 831539 46249719 ~ 46267255 (+)
G49103 NA non-coding upstream 62398 45350934 ~ 45352308 (+)
G49102 NA non-coding upstream 66047 45346523 ~ 45348659 (+)
G49095 NA non-coding upstream 87326 45327105 ~ 45327380 (+)
G49092 NA non-coding upstream 88306 45324868 ~ 45326400 (+)
G49093 NA non-coding upstream 90133 45323224 ~ 45324573 (+)
G49146 NA non-coding downstream 6412 45424592 ~ 45424793 (+)
G49183 ppfibp2 non-coding downstream 86609 45504789 ~ 45515074 (+)
G49221 NA non-coding downstream 151704 45569884 ~ 45570473 (+)
G49288 NA non-coding downstream 236217 45654397 ~ 45703120 (+)
G49335 LOC106573225 non-coding downstream 312061 45730241 ~ 45736780 (+)
G48976 NA other upstream 268066 45145278 ~ 45146640 (+)
G47910 LOC106573211 other upstream 623616 44789630 ~ 44791090 (+)
e2f4 LOC106573204 other upstream 666701 44720664 ~ 44748569 (+)
G47667 LOC106573189 other upstream 1270990 44139091 ~ 44143716 (+)
G50010 LOC106573227 other downstream 574093 45992273 ~ 45992891 (+)
LOC110524042 NA other downstream 1439728 46854230 ~ 46861465 (+)
LOC110520864 NA other downstream 1809066 47227246 ~ 47260224 (+)
G52080 NA other downstream 2588494 48006674 ~ 48024958 (+)

Expression


Co-expression Network