G49146


Basic Information

Item Value
gene id G49146
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 45424592 ~ 45424793 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU54923
actttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggaaagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagttttctccttgtatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54923 True 202 lncRNA 0.42 1 45424592 45424793

Neighbor

gene id symbol gene type direction distance location
LOC110523687 LOC106573214 coding upstream 309244 45092982 ~ 45115348 (+)
LOC110523657 NA coding upstream 352159 45071354 ~ 45072433 (+)
galnt18a LOC106573212 coding upstream 362158 44961201 ~ 45062434 (+)
vac14 vac14 coding upstream 537634 44856908 ~ 44886958 (+)
LOC110523812 facr1 coding downstream 2877 45427670 ~ 45446413 (+)
LOC118964647 NA coding downstream 27243 45452036 ~ 45454827 (+)
LOC110523825 LOC106573223 coding downstream 41703 45466496 ~ 45471513 (+)
wt-t1a wt-t1a coding downstream 717213 46142006 ~ 46159522 (+)
LOC110523948 LOC106573232 coding downstream 824926 46249719 ~ 46267255 (+)
G49103 NA non-coding upstream 72284 45350934 ~ 45352308 (+)
G49102 NA non-coding upstream 75933 45346523 ~ 45348659 (+)
G49095 NA non-coding upstream 97212 45327105 ~ 45327380 (+)
G49092 NA non-coding upstream 98192 45324868 ~ 45326400 (+)
G49093 NA non-coding upstream 100019 45323224 ~ 45324573 (+)
G49183 ppfibp2 non-coding downstream 79996 45504789 ~ 45515074 (+)
G49221 NA non-coding downstream 145091 45569884 ~ 45570473 (+)
G49288 NA non-coding downstream 229604 45654397 ~ 45703120 (+)
G49335 LOC106573225 non-coding downstream 305448 45730241 ~ 45736780 (+)
G49977 NA non-coding downstream 540424 45965217 ~ 45965531 (+)
G49142 NA other upstream 6412 45414706 ~ 45418180 (+)
G48976 NA other upstream 277952 45145278 ~ 45146640 (+)
G47910 LOC106573211 other upstream 633502 44789630 ~ 44791090 (+)
e2f4 LOC106573204 other upstream 676587 44720664 ~ 44748569 (+)
G50010 LOC106573227 other downstream 567480 45992273 ~ 45992891 (+)
LOC110524042 NA other downstream 1433115 46854230 ~ 46861465 (+)
LOC110520864 NA other downstream 1802453 47227246 ~ 47260224 (+)
G52080 NA other downstream 2581881 48006674 ~ 48024958 (+)

Expression


Co-expression Network