Gene
RNA
| Item | Value |
|---|---|
| gene id | G49777 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 45724159 ~ 45724388 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU55613 | True | 230 | lncRNA | 0.37 | 1 | 45724159 | 45724388 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523892 | LOC106573278 | coding | downstream | 43501 | 45632171 ~ 45680658 (-) |
| LOC110523834 | LOC106573224 | coding | downstream | 137078 | 45476653 ~ 45587081 (-) |
| LOC118964648 | NA | coding | downstream | 246318 | 45476653 ~ 45477841 (-) |
| LOC110523755 | NA | coding | downstream | 309495 | 45325909 ~ 45414664 (-) |
| parvaa | LOC106573218 | coding | downstream | 402488 | 45304638 ~ 45321671 (-) |
| LOC110523903 | LOC106573225 | coding | upstream | 5847 | 45730235 ~ 45867098 (-) |
| LOC110523913 | LOC106573227 | coding | upstream | 263558 | 45987946 ~ 46025205 (-) |
| LOC110523921 | LOC106573228 | coding | upstream | 301390 | 46025778 ~ 46076741 (-) |
| tcp11l1 | tcp11l1 | coding | upstream | 361194 | 46085582 ~ 46097107 (-) |
| LOC110524015 | LOC106573241 | coding | upstream | 1013047 | 46737435 ~ 46743033 (-) |
| G49759 | NA | non-coding | downstream | 24281 | 45699156 ~ 45699878 (-) |
| G49619 | NA | non-coding | downstream | 244737 | 45476563 ~ 45479422 (-) |
| G49459 | LOC108441480 | non-coding | downstream | 272428 | 45435672 ~ 45451731 (-) |
| G49560 | NA | non-coding | downstream | 342021 | 45360643 ~ 45382138 (-) |
| G49556 | NA | non-coding | downstream | 364608 | 45339225 ~ 45359551 (-) |
| G49817 | NA | non-coding | upstream | 67764 | 45792152 ~ 45793197 (-) |
| G49872 | NA | non-coding | upstream | 155403 | 45879791 ~ 45880234 (-) |
| G49907 | NA | non-coding | upstream | 156682 | 45881070 ~ 45939772 (-) |
| G49931 | NA | non-coding | upstream | 184647 | 45909035 ~ 45921445 (-) |
| G49978 | NA | non-coding | upstream | 240670 | 45965058 ~ 45965266 (-) |
| G49774 | NA | other | downstream | 3035 | 45720805 ~ 45721124 (-) |
| tspan9a | LOC106573177 | other | downstream | 2595130 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 6702134 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 7532423 | 38187488 ~ 38191736 (-) |
| G40732 | NA | other | downstream | 7598434 | 38125280 ~ 38125725 (-) |
| G49962 | NA | other | upstream | 224570 | 45948958 ~ 45949951 (-) |
| G51214 | NA | other | upstream | 1340386 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 1564551 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 1653253 | 47377641 ~ 47378543 (-) |
| LOC110524104 | LOC106573248 | other | upstream | 1817988 | 47541224 ~ 47561223 (-) |
