Gene
RNA
| Item | Value |
|---|---|
| gene id | G49997 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 45977125 ~ 45977374 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU55837 | True | 250 | lncRNA | 0.38 | 1 | 45977125 | 45977374 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523903 | LOC106573225 | coding | downstream | 110027 | 45730235 ~ 45867098 (-) |
| LOC110523892 | LOC106573278 | coding | downstream | 296467 | 45632171 ~ 45680658 (-) |
| LOC110523834 | LOC106573224 | coding | downstream | 390044 | 45476653 ~ 45587081 (-) |
| LOC118964648 | NA | coding | downstream | 499284 | 45476653 ~ 45477841 (-) |
| LOC110523755 | NA | coding | downstream | 562461 | 45325909 ~ 45414664 (-) |
| LOC110523913 | LOC106573227 | coding | upstream | 10572 | 45987946 ~ 46025205 (-) |
| LOC110523921 | LOC106573228 | coding | upstream | 48404 | 46025778 ~ 46076741 (-) |
| tcp11l1 | tcp11l1 | coding | upstream | 108208 | 46085582 ~ 46097107 (-) |
| LOC110524015 | LOC106573241 | coding | upstream | 760061 | 46737435 ~ 46743033 (-) |
| LOC110524028 | LOC106561496 | coding | upstream | 839682 | 46817056 ~ 46839553 (-) |
| G49978 | NA | non-coding | downstream | 11859 | 45965058 ~ 45965266 (-) |
| G49907 | NA | non-coding | downstream | 37353 | 45881070 ~ 45939772 (-) |
| G49931 | NA | non-coding | downstream | 55680 | 45909035 ~ 45921445 (-) |
| G49872 | NA | non-coding | downstream | 96891 | 45879791 ~ 45880234 (-) |
| G49817 | NA | non-coding | downstream | 183928 | 45792152 ~ 45793197 (-) |
| G50001 | LOC106674859 | non-coding | upstream | 2278 | 45979652 ~ 45980496 (-) |
| G50230 | NA | non-coding | upstream | 27925 | 46005299 ~ 46005507 (-) |
| G50233 | NA | non-coding | upstream | 38286 | 46015660 ~ 46015867 (-) |
| G50234 | NA | non-coding | upstream | 38698 | 46016072 ~ 46017322 (-) |
| G50262 | NA | non-coding | upstream | 133280 | 46110654 ~ 46110971 (-) |
| G49962 | NA | other | downstream | 27174 | 45948958 ~ 45949951 (-) |
| G49774 | NA | other | downstream | 256001 | 45720805 ~ 45721124 (-) |
| tspan9a | LOC106573177 | other | downstream | 2848096 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 6955100 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 7785389 | 38187488 ~ 38191736 (-) |
| G51214 | NA | other | upstream | 1087400 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 1311565 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 1400267 | 47377641 ~ 47378543 (-) |
| LOC110524104 | LOC106573248 | other | upstream | 1565002 | 47541224 ~ 47561223 (-) |
| LOC110524264 | LOC106573263 | other | upstream | 2316734 | 48291626 ~ 48304829 (-) |
