G50009


Basic Information

Item Value
gene id G50009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 45991062 ~ 45991429 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU55849
CCTGAGTAGCTGGTCATGGACTGGTCAACAGTAACAGCAGGGAAGGGCGCTCTGTTGAGAGGCAGATAGGGGGCACCATTGTGCTGACTCTGCATCTCAGAGGCCTCGGAAACACGAGGCTTCAGGCTGACATCGGGTGAAGAACTGCAGAAGGGGAAACAAAGACAAAAGCCTTGTAATTCATACATCTCACCACTGGGTGGCCTGTAAACCTCATGCGCAAACCTGGTTACAGTCAAGGCATTCAAATGAAGATGCtatttgttttaaataatgcGGGAAAAAAGTACAGCGCAGAGTAGAATTACAACACAATGCATGAACAGTATGACATCTAAAGCCAAAGGACTTAAACTGAACAatttttc

Function

NR:

description
UPF0606 protein KIAA1549L-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55849 True 368 lncRNA 0.46 1 45991062 45991429

Neighbor

gene id symbol gene type direction distance location
LOC110523825 LOC106573223 coding upstream 519549 45466496 ~ 45471513 (+)
LOC118964647 NA coding upstream 536235 45452036 ~ 45454827 (+)
LOC110523812 facr1 coding upstream 544649 45427670 ~ 45446413 (+)
LOC110523687 LOC106573214 coding upstream 875714 45092982 ~ 45115348 (+)
LOC110523657 NA coding upstream 918629 45071354 ~ 45072433 (+)
wt-t1a wt-t1a coding downstream 150577 46142006 ~ 46159522 (+)
LOC110523948 LOC106573232 coding downstream 258290 46249719 ~ 46267255 (+)
LOC118962389 dcdc1 coding downstream 478067 46469496 ~ 46477752 (+)
LOC118964304 dcdc5 coding downstream 507581 46499010 ~ 46503478 (+)
LOC110532345 dcdc5 coding downstream 512385 46503814 ~ 46505112 (+)
G50008 NA non-coding upstream 644 45987974 ~ 45990418 (+)
G49999 NA non-coding upstream 12564 45978266 ~ 45978498 (+)
G49977 NA non-coding upstream 25531 45965217 ~ 45965531 (+)
G49335 LOC106573225 non-coding upstream 259440 45730241 ~ 45736780 (+)
G49288 NA non-coding upstream 287942 45654397 ~ 45703120 (+)
G50011 LOC106573227 non-coding downstream 2523 45993952 ~ 45994217 (+)
G50012 NA non-coding downstream 2930 45994359 ~ 45994892 (+)
G50013 NA non-coding downstream 3639 45995068 ~ 45995681 (+)
G50014 NA non-coding downstream 4921 45996350 ~ 45997699 (+)
G50015 NA non-coding downstream 8145 45999574 ~ 46000629 (+)
G49142 NA other upstream 572882 45414706 ~ 45418180 (+)
G48976 NA other upstream 844422 45145278 ~ 45146640 (+)
G47910 LOC106573211 other upstream 1199972 44789630 ~ 44791090 (+)
G50010 LOC106573227 other downstream 844 45992273 ~ 45992891 (+)
LOC110524042 NA other downstream 866479 46854230 ~ 46861465 (+)
LOC110520864 NA other downstream 1235817 47227246 ~ 47260224 (+)
G52080 NA other downstream 2015245 48006674 ~ 48024958 (+)
G52324 NA other downstream 2389113 48380542 ~ 48383257 (+)

Expression


Co-expression Network