G50014


Basic Information

Item Value
gene id G50014
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 45996350 ~ 45997699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU55857
CAGTGCCTTCAAGGCCCAGTAATCATTGCAGCAGACTCATGTCACACCTCCAGCATGGCGGCCGTAAATATGGCACTAAAAAGTCCAAGTGGGTCTAAATCAGCCAAAGATAGGGGAGATCTGTTTGACAGCTGACAATGACGGATGTTTTGGGTTgggtcagtaaaaaaaaaatcaagccTTTGGTTGGTCTGTACCATTTCTTCCAGTGTGTTAGAATGAGCATTTTTATGCATTGGAAATTCAAAGGAAAGATGGCTCGATAGGCAGCTCAAGCTTAGCTTTGGCTACGTTTAGACAGGCAGACCGATTCTGATATTGTTTTCACTAACTgtttttttgaccaatcagatccgCTATTACAAAGATCTGGTGTGACAATATCTggtgtgattggtcaaaagaccaattggtGGGAAaagatatcagaattgggctgcctgtctaaacacagtCTTTAGTGTTCTAGactagagggaagagaggaggctgtattCATTTTGTGGCACGGCAATAACGCATTCATGAATCACAAGTTTTTCATTACAAATTCTTCTTTCTATTGCCTTTTCCTAGTGATAGATGGCTACGATTCTTGGAATTGGCAACACCCAGGCAAACTGTAAGCCAGTCAACATGAGCAGATTTAAGCAGATTCTATGCAATCTGTCCAAGACTGTCATATTTTTGGTGCATTTTCCTTGACTTAAAGTATTGCCACAAACAAATCCAAATGTGTTCTGGTAATCTAAAGAAAACAGGGAGATCATTCTGTTTAAATTGAATTCAGTGTTTTTCTTACCCTTTGTGGATGATGTCAGCAGAAGGAGGTCTTTTAGAGGCAGTCCCATCCTGGTGCACCTTCCTGTCCAATGACAACGGGGCATCTCTCACTGGGAGGCCCAGAACCAGCGTCTCCTTGGTAACAGAGACGGTCTCCTCACCTTGCTGATGGCCTATGTGCTTCTTGGCATAGTCAAATCCCTGCACATGCTGGGACAGAGAGGGTTTACGATGACATATGATCTgtggtaaagtaaaggagaatgACATTTAATTTACAGATAAGGTAAATGACAAAGTTGGCTCGGTGAGCTCTGATTTCTCTCAGTCAGCAAGTAAAGACTACTAAATGTTCAAACGAAGTGTCTAATAGCACCTTTGAAGTTGGGATATATTGGAAGAAAGAAATTGACAATTAAATTGGTTTATGATTTATATTATACCTAGGCAGTTTCTTTGTTTCACCAAATTACTCTCATTTCATGAAGCCTCTCTGCATTGCAAAACAGCGAAATGAACAGAATGTACAGACAGAtacatttgttttcaaattcaatTTTTTTTGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55857 True 1350 lncRNA 0.42 1 45996350 45997699

Neighbor

gene id symbol gene type direction distance location
LOC110523825 LOC106573223 coding upstream 524837 45466496 ~ 45471513 (+)
LOC118964647 NA coding upstream 541523 45452036 ~ 45454827 (+)
LOC110523812 facr1 coding upstream 549937 45427670 ~ 45446413 (+)
LOC110523687 LOC106573214 coding upstream 881002 45092982 ~ 45115348 (+)
LOC110523657 NA coding upstream 923917 45071354 ~ 45072433 (+)
wt-t1a wt-t1a coding downstream 144307 46142006 ~ 46159522 (+)
LOC110523948 LOC106573232 coding downstream 252020 46249719 ~ 46267255 (+)
LOC118962389 dcdc1 coding downstream 471797 46469496 ~ 46477752 (+)
LOC118964304 dcdc5 coding downstream 501311 46499010 ~ 46503478 (+)
LOC110532345 dcdc5 coding downstream 506115 46503814 ~ 46505112 (+)
G50013 NA non-coding upstream 669 45995068 ~ 45995681 (+)
G50012 NA non-coding upstream 1458 45994359 ~ 45994892 (+)
G50011 LOC106573227 non-coding upstream 2133 45993952 ~ 45994217 (+)
G50009 NA non-coding upstream 4921 45991062 ~ 45991429 (+)
G50008 NA non-coding upstream 5932 45987974 ~ 45990418 (+)
G50015 NA non-coding downstream 1875 45999574 ~ 46000629 (+)
G50016 NA non-coding downstream 3269 46000968 ~ 46001791 (+)
G50020 NA non-coding downstream 8577 46006276 ~ 46006712 (+)
G50021 LOC106573227 non-coding downstream 9351 46007050 ~ 46007332 (+)
G50022 NA non-coding downstream 10272 46007971 ~ 46008537 (+)
G50010 LOC106573227 other upstream 3459 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 259570 45730241 ~ 45736780 (+)
G49142 NA other upstream 578170 45414706 ~ 45418180 (+)
G48976 NA other upstream 849710 45145278 ~ 45146640 (+)
LOC110524042 NA other downstream 860209 46854230 ~ 46861465 (+)
LOC110520864 NA other downstream 1229547 47227246 ~ 47260224 (+)
G52080 NA other downstream 2008975 48006674 ~ 48024958 (+)
G52324 NA other downstream 2382843 48380542 ~ 48383257 (+)
G53181 NA other downstream 2895798 48893497 ~ 48893912 (+)

Expression


Co-expression Network