G50015


Basic Information

Item Value
gene id G50015
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 45999574 ~ 46000629 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU55858
ATCATGCTTATTGAGCACCCATCACTATCGTCACCATTGGCTAGAAGTAATTGAGCGAACTCAAGACAAAGTGTTAAGACCCGCCCAAGATAAAGACATTTCTCGGAACTGCGCATTAAGGTGATAAGAGATATGCAAAGTTCACCTTAGAGCGGGGTTTGAAGCTCCTGAAAGCGCCCGTCTTGAAGATGACCCTGTTCCTCTTGCACAGGATGGCGGTGACCATGGCGACAACAACCATCACCAGGGCAACAGGCGTCAGCACAGCCATGATCCACAGATTGGCAGGCGGGCCCTTTACCACAGCTGTCGGGGAACCATGGAGACCAAATAAATACACCCATATCTATCAATATGTATTTTTGTTTGCAATCATTACAAAATGATTGAGGCACATAGCTATTCAACAGGCTACGAGACAGATAGAAGTGCTTCAGCCTGAGCATAACTAAAATATACTGCAATAACTCCTATGCATCCATCTCTTTATGACTGAAAAAGCTAGTTCTGTAGACTTCATGTAAGAGAATAATGTTAAGGCTGTTTGGTAaagatgtgtaaaaaaaaataataacctACGATCAGCTTGGAGCAGGACAAAGTAGCCCAGAGTGAGGGCCATGGTTTGGGAATCCAAGGTACTGAGGGTCTTAGCTGCAGTGGTGCCAGTTATGGGGGCACCATTCAGTTGGGCATAGTAGGTCATTTCGGCTGAGTTCTTAGGCCCCGGGAGTCGACGAATGCCAACCATCTAAACAAGAGCAGCACAATTTGGTGGATTCGGTGCTGTCATATGGCATGAGACATGCAGTGCTGTCATATGAGACATTGCAAAAATACAATAGCAGTAATTATGTATTTGAAACACTCCAAAAATAACAGCACTCAGGGAACACACTCATGGGATTAATATGAATCAGTGGAATTCATTGTATTTTAGTATAGATCACATGTTTAATGTCCATAATACGTCATAATGGTTTCATCACGGGCTGTGATTAAAGCTTGCCATAAAGAAGGGGGAAGGGAGTGTTAAATGGAAGAGCTCAACATCCG

Function

NR:

description
UPF0606 protein KIAA1549L-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55858 True 1056 lncRNA 0.44 1 45999574 46000629

Neighbor

gene id symbol gene type direction distance location
LOC110523825 LOC106573223 coding upstream 528061 45466496 ~ 45471513 (+)
LOC118964647 NA coding upstream 544747 45452036 ~ 45454827 (+)
LOC110523812 facr1 coding upstream 553161 45427670 ~ 45446413 (+)
LOC110523687 LOC106573214 coding upstream 884226 45092982 ~ 45115348 (+)
LOC110523657 NA coding upstream 927141 45071354 ~ 45072433 (+)
wt-t1a wt-t1a coding downstream 141377 46142006 ~ 46159522 (+)
LOC110523948 LOC106573232 coding downstream 249090 46249719 ~ 46267255 (+)
LOC118962389 dcdc1 coding downstream 468867 46469496 ~ 46477752 (+)
LOC118964304 dcdc5 coding downstream 498381 46499010 ~ 46503478 (+)
LOC110532345 dcdc5 coding downstream 503185 46503814 ~ 46505112 (+)
G50014 NA non-coding upstream 1875 45996350 ~ 45997699 (+)
G50013 NA non-coding upstream 3893 45995068 ~ 45995681 (+)
G50012 NA non-coding upstream 4682 45994359 ~ 45994892 (+)
G50011 LOC106573227 non-coding upstream 5357 45993952 ~ 45994217 (+)
G50009 NA non-coding upstream 8145 45991062 ~ 45991429 (+)
G50016 NA non-coding downstream 339 46000968 ~ 46001791 (+)
G50020 NA non-coding downstream 5647 46006276 ~ 46006712 (+)
G50021 LOC106573227 non-coding downstream 6421 46007050 ~ 46007332 (+)
G50022 NA non-coding downstream 7342 46007971 ~ 46008537 (+)
G50024 LOC106573227 non-coding downstream 9160 46009789 ~ 46010091 (+)
G50010 LOC106573227 other upstream 6683 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 262794 45730241 ~ 45736780 (+)
G49142 NA other upstream 581394 45414706 ~ 45418180 (+)
G48976 NA other upstream 852934 45145278 ~ 45146640 (+)
LOC110524042 NA other downstream 857279 46854230 ~ 46861465 (+)
LOC110520864 NA other downstream 1226617 47227246 ~ 47260224 (+)
G52080 NA other downstream 2006045 48006674 ~ 48024958 (+)
G52324 NA other downstream 2379913 48380542 ~ 48383257 (+)
G53181 NA other downstream 2892868 48893497 ~ 48893912 (+)

Expression


Co-expression Network