Gene
RNA
| Item | Value |
|---|---|
| gene id | G50262 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 46110654 ~ 46110971 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU56156 | True | 318 | lncRNA | 0.47 | 1 | 46110654 | 46110971 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tcp11l1 | tcp11l1 | coding | downstream | 13547 | 46085582 ~ 46097107 (-) |
| LOC110523921 | LOC106573228 | coding | downstream | 33913 | 46025778 ~ 46076741 (-) |
| LOC110523913 | LOC106573227 | coding | downstream | 85449 | 45987946 ~ 46025205 (-) |
| LOC110523903 | LOC106573225 | coding | downstream | 243556 | 45730235 ~ 45867098 (-) |
| LOC110523892 | LOC106573278 | coding | downstream | 429996 | 45632171 ~ 45680658 (-) |
| LOC110524015 | LOC106573241 | coding | upstream | 626464 | 46737435 ~ 46743033 (-) |
| LOC110524028 | LOC106561496 | coding | upstream | 706085 | 46817056 ~ 46839553 (-) |
| LOC118964698 | NA | coding | upstream | 790350 | 46901321 ~ 46902393 (-) |
| LOC118964697 | NA | coding | upstream | 835077 | 46946048 ~ 46947526 (-) |
| LOC118964694 | NA | coding | upstream | 861798 | 46972769 ~ 46974689 (-) |
| G50234 | NA | non-coding | downstream | 93332 | 46016072 ~ 46017322 (-) |
| G50233 | NA | non-coding | downstream | 94787 | 46015660 ~ 46015867 (-) |
| G50230 | NA | non-coding | downstream | 105147 | 46005299 ~ 46005507 (-) |
| G50001 | LOC106674859 | non-coding | downstream | 130158 | 45979652 ~ 45980496 (-) |
| G49997 | NA | non-coding | downstream | 133280 | 45977125 ~ 45977374 (-) |
| G50282 | wt1 | non-coding | upstream | 45754 | 46156725 ~ 46159520 (-) |
| G50306 | NA | non-coding | upstream | 82523 | 46193494 ~ 46194056 (-) |
| G50307 | NA | non-coding | upstream | 83521 | 46194492 ~ 46194720 (-) |
| G50357 | NA | non-coding | upstream | 150104 | 46261075 ~ 46265574 (-) |
| G50360 | NA | non-coding | upstream | 162295 | 46273266 ~ 46273506 (-) |
| G49962 | NA | other | downstream | 160703 | 45948958 ~ 45949951 (-) |
| G49774 | NA | other | downstream | 389530 | 45720805 ~ 45721124 (-) |
| tspan9a | LOC106573177 | other | downstream | 2981625 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 7088629 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 7918918 | 38187488 ~ 38191736 (-) |
| G51214 | NA | other | upstream | 953803 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 1177968 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 1266670 | 47377641 ~ 47378543 (-) |
| LOC110524104 | LOC106573248 | other | upstream | 1431405 | 47541224 ~ 47561223 (-) |
| LOC110524264 | LOC106573263 | other | upstream | 2183137 | 48291626 ~ 48304829 (-) |
