G50098


Basic Information

Item Value
gene id G50098
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46123021 ~ 46123223 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU55960
GTATACACCAGAGATGACAACCAGCCAGACGTGATAAACACGGAGGCAGCCAGAAAAGCAGCATCATCATTTCAGGACATTGGCCCAGTCCGAGCTGAGACCCCATCGGCAGTCTCACAGTCCTCAGATCCATGCAACGCGCTTCCTCAGAAGGTCTTTGAAATCAATGTAATAAGATGTCACACGCCAGAGGTCAACGATGT

Function

NR:

description
coiled-coil domain-containing protein 73 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55960 True 203 lncRNA 0.50 1 46123021 46123223

Neighbor

gene id symbol gene type direction distance location
LOC110523825 LOC106573223 coding upstream 651508 45466496 ~ 45471513 (+)
LOC118964647 NA coding upstream 668194 45452036 ~ 45454827 (+)
LOC110523812 facr1 coding upstream 676608 45427670 ~ 45446413 (+)
LOC110523687 LOC106573214 coding upstream 1007673 45092982 ~ 45115348 (+)
LOC110523657 NA coding upstream 1050588 45071354 ~ 45072433 (+)
wt-t1a wt-t1a coding downstream 18783 46142006 ~ 46159522 (+)
LOC110523948 LOC106573232 coding downstream 126496 46249719 ~ 46267255 (+)
LOC118962389 dcdc1 coding downstream 346273 46469496 ~ 46477752 (+)
LOC118964304 dcdc5 coding downstream 375787 46499010 ~ 46503478 (+)
LOC110532345 dcdc5 coding downstream 380591 46503814 ~ 46505112 (+)
G50092 NA non-coding upstream 10203 46112611 ~ 46112818 (+)
G50089 NA non-coding upstream 14180 46108624 ~ 46108841 (+)
G50057 NA non-coding upstream 30535 46051187 ~ 46092486 (+)
G50036 NA non-coding upstream 95245 46025782 ~ 46027776 (+)
G50035 LOC106573227 non-coding upstream 97812 46024204 ~ 46025209 (+)
G50180 NA non-coding downstream 149655 46272878 ~ 46273108 (+)
G50182 NA non-coding downstream 152194 46275417 ~ 46275638 (+)
G50192 NA non-coding downstream 168935 46292158 ~ 46292372 (+)
G50194 NA non-coding downstream 171180 46294403 ~ 46294610 (+)
G50200 NA non-coding downstream 182777 46306000 ~ 46306226 (+)
G50010 LOC106573227 other upstream 130130 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 386241 45730241 ~ 45736780 (+)
G49142 NA other upstream 704841 45414706 ~ 45418180 (+)
G48976 NA other upstream 976381 45145278 ~ 45146640 (+)
LOC110524042 NA other downstream 734685 46854230 ~ 46861465 (+)
LOC110520864 NA other downstream 1104023 47227246 ~ 47260224 (+)
G52080 NA other downstream 1883451 48006674 ~ 48024958 (+)
G52324 NA other downstream 2257319 48380542 ~ 48383257 (+)
G53181 NA other downstream 2770274 48893497 ~ 48893912 (+)

Expression


Co-expression Network