G50180


Basic Information

Item Value
gene id G50180
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46272878 ~ 46273108 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56074
aaaaaaaagcagacatcgaatatccttttgagcatggtgaagttatgagttacactttggatgttgtatcaatacacccagtcactacaacgatacaggcgtcctttctaactcagttgccggtgaGGACGAAAACCGCTCAGGGgtttcatcatgaggccaatggcgactttaaaacagtaagagtttaaaggctgtgataggagaaaagtgaggatggatcaacaacat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56074 True 231 lncRNA 0.50 1 46272878 46273108

Neighbor

gene id symbol gene type direction distance location
LOC110523948 LOC106573232 coding upstream 5623 46249719 ~ 46267255 (+)
wt-t1a wt-t1a coding upstream 113356 46142006 ~ 46159522 (+)
LOC110523825 LOC106573223 coding upstream 801365 45466496 ~ 45471513 (+)
LOC118964647 NA coding upstream 818051 45452036 ~ 45454827 (+)
LOC110523812 facr1 coding upstream 826465 45427670 ~ 45446413 (+)
LOC118962389 dcdc1 coding downstream 196388 46469496 ~ 46477752 (+)
LOC118964304 dcdc5 coding downstream 225902 46499010 ~ 46503478 (+)
LOC110532345 dcdc5 coding downstream 230706 46503814 ~ 46505112 (+)
LOC118964305 NA coding downstream 232140 46505248 ~ 46508046 (+)
LOC118966744 NA coding downstream 239428 46512536 ~ 46512590 (+)
G50098 NA non-coding upstream 149655 46123021 ~ 46123223 (+)
G50092 NA non-coding upstream 160060 46112611 ~ 46112818 (+)
G50089 NA non-coding upstream 164037 46108624 ~ 46108841 (+)
G50057 NA non-coding upstream 180392 46051187 ~ 46092486 (+)
G50036 NA non-coding upstream 245102 46025782 ~ 46027776 (+)
G50182 NA non-coding downstream 2309 46275417 ~ 46275638 (+)
G50192 NA non-coding downstream 19050 46292158 ~ 46292372 (+)
G50194 NA non-coding downstream 21295 46294403 ~ 46294610 (+)
G50200 NA non-coding downstream 32892 46306000 ~ 46306226 (+)
G50409 NA non-coding downstream 73695 46346803 ~ 46347162 (+)
G50010 LOC106573227 other upstream 279987 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 536098 45730241 ~ 45736780 (+)
G49142 NA other upstream 854698 45414706 ~ 45418180 (+)
G48976 NA other upstream 1126238 45145278 ~ 45146640 (+)
LOC110523657 NA other upstream 1200449 45071354 ~ 45072433 (+)
LOC110524042 NA other downstream 584800 46854230 ~ 46861465 (+)
LOC110520864 NA other downstream 954138 47227246 ~ 47260224 (+)
G52080 NA other downstream 1733566 48006674 ~ 48024958 (+)
G52324 NA other downstream 2107434 48380542 ~ 48383257 (+)
G53181 NA other downstream 2620389 48893497 ~ 48893912 (+)

Expression


Co-expression Network