G50192


Basic Information

Item Value
gene id G50192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46292158 ~ 46292372 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56086
GCAAATGACATGTAAATTATGAATGGCGGATTCCTTGCTTTCCATGACAGTGTTAAATAAGGGAGGTGTAAGTGAAATCATTAGATTATGCCAGTTGGGGTGGAGGGATGCTTTTCAAAGGTTGTCTTCGAGGGCCCACAGCCAGCGCAGCTATAAACGATGTAGTCGGAGACCATTTCAAACAGCACTGGGAGAATGAGGAACCAGACCTTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56086 True 215 lncRNA 0.45 1 46292158 46292372

Neighbor

gene id symbol gene type direction distance location
LOC110523948 LOC106573232 coding upstream 24903 46249719 ~ 46267255 (+)
wt-t1a wt-t1a coding upstream 132636 46142006 ~ 46159522 (+)
LOC110523825 LOC106573223 coding upstream 820645 45466496 ~ 45471513 (+)
LOC118964647 NA coding upstream 837331 45452036 ~ 45454827 (+)
LOC110523812 facr1 coding upstream 845745 45427670 ~ 45446413 (+)
LOC118962389 dcdc1 coding downstream 177124 46469496 ~ 46477752 (+)
LOC118964304 dcdc5 coding downstream 206638 46499010 ~ 46503478 (+)
LOC110532345 dcdc5 coding downstream 211442 46503814 ~ 46505112 (+)
LOC118964305 NA coding downstream 212876 46505248 ~ 46508046 (+)
LOC118966744 NA coding downstream 220164 46512536 ~ 46512590 (+)
G50182 NA non-coding upstream 16520 46275417 ~ 46275638 (+)
G50180 NA non-coding upstream 19050 46272878 ~ 46273108 (+)
G50098 NA non-coding upstream 168935 46123021 ~ 46123223 (+)
G50092 NA non-coding upstream 179340 46112611 ~ 46112818 (+)
G50089 NA non-coding upstream 183317 46108624 ~ 46108841 (+)
G50194 NA non-coding downstream 2031 46294403 ~ 46294610 (+)
G50200 NA non-coding downstream 13628 46306000 ~ 46306226 (+)
G50409 NA non-coding downstream 54431 46346803 ~ 46347162 (+)
G50410 NA non-coding downstream 54967 46347339 ~ 46347540 (+)
G50415 NA non-coding downstream 57856 46350228 ~ 46350516 (+)
G50010 LOC106573227 other upstream 299267 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 555378 45730241 ~ 45736780 (+)
G49142 NA other upstream 873978 45414706 ~ 45418180 (+)
G48976 NA other upstream 1145518 45145278 ~ 45146640 (+)
LOC110523657 NA other upstream 1219729 45071354 ~ 45072433 (+)
LOC110524042 NA other downstream 565536 46854230 ~ 46861465 (+)
LOC110520864 NA other downstream 934874 47227246 ~ 47260224 (+)
G52080 NA other downstream 1714302 48006674 ~ 48024958 (+)
G52324 NA other downstream 2088170 48380542 ~ 48383257 (+)
G53181 NA other downstream 2601125 48893497 ~ 48893912 (+)

Expression


Co-expression Network