G50200


Basic Information

Item Value
gene id G50200
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46306000 ~ 46306226 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56094
CATTTAAAATCATCCTCTGCTTACAATGGAGCTCAAAAATTTCCTACAAAATAGAAGGCGGATCTACTTACACAACCTTTTTTTTGAAGTAGTGTTACTCTTTATGCCAGTCCGTGAATAATCTATTCACCACAATAAAGTACATTCTTCGGTGATCAATACACATTATCTGTGCTCAGATAGATCTCTATACAGCTCCATTGAATAGCTAGCTACCTGTGAGGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56094 True 227 lncRNA 0.36 1 46306000 46306226

Neighbor

gene id symbol gene type direction distance location
LOC110523948 LOC106573232 coding upstream 38745 46249719 ~ 46267255 (+)
wt-t1a wt-t1a coding upstream 146478 46142006 ~ 46159522 (+)
LOC110523825 LOC106573223 coding upstream 834487 45466496 ~ 45471513 (+)
LOC118964647 NA coding upstream 851173 45452036 ~ 45454827 (+)
LOC110523812 facr1 coding upstream 859587 45427670 ~ 45446413 (+)
LOC118962389 dcdc1 coding downstream 163270 46469496 ~ 46477752 (+)
LOC118964304 dcdc5 coding downstream 192784 46499010 ~ 46503478 (+)
LOC110532345 dcdc5 coding downstream 197588 46503814 ~ 46505112 (+)
LOC118964305 NA coding downstream 199022 46505248 ~ 46508046 (+)
LOC118966744 NA coding downstream 206310 46512536 ~ 46512590 (+)
G50194 NA non-coding upstream 11390 46294403 ~ 46294610 (+)
G50192 NA non-coding upstream 13628 46292158 ~ 46292372 (+)
G50182 NA non-coding upstream 30362 46275417 ~ 46275638 (+)
G50180 NA non-coding upstream 32892 46272878 ~ 46273108 (+)
G50098 NA non-coding upstream 182777 46123021 ~ 46123223 (+)
G50409 NA non-coding downstream 40577 46346803 ~ 46347162 (+)
G50410 NA non-coding downstream 41113 46347339 ~ 46347540 (+)
G50415 NA non-coding downstream 44002 46350228 ~ 46350516 (+)
G50416 NA non-coding downstream 44922 46351148 ~ 46351382 (+)
G50455 NA non-coding downstream 102128 46408354 ~ 46408602 (+)
G50010 LOC106573227 other upstream 313109 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 569220 45730241 ~ 45736780 (+)
G49142 NA other upstream 887820 45414706 ~ 45418180 (+)
G48976 NA other upstream 1159360 45145278 ~ 45146640 (+)
LOC110523657 NA other upstream 1233571 45071354 ~ 45072433 (+)
LOC110524042 NA other downstream 551682 46854230 ~ 46861465 (+)
LOC110520864 NA other downstream 921020 47227246 ~ 47260224 (+)
G52080 NA other downstream 1700448 48006674 ~ 48024958 (+)
G52324 NA other downstream 2074316 48380542 ~ 48383257 (+)
G53181 NA other downstream 2587271 48893497 ~ 48893912 (+)

Expression


Co-expression Network