G50824


Basic Information

Item Value
gene id G50824
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46350310 ~ 46350911 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56784
GTGGGCGCATACACCGCTAGGTACCCTAGCTGTTatatcaaatgttatttatcccaggtgtagaccttatcatgaaatgcttacttacaagcccttaactaacaatgcagttcaagaaatagagttaataaaatatttactaaataaacaaaatatatatatttttaaatcaaagtgataaggaaatgtgttttaataaatgattAGACTGTTACAGTCCTGAAACCATAGGTCTGATACCATGTGATTGTATGAAATTAATTTGAATCATTAGATTATTATAATACATGTGTGTAAGTGTTAGACTCATTCGATGATTATattataatactgtgtgtggtttTAGTCAGAATCAACGTTTGGGAACAATGTGTCTAGTGTTTTGAGAACAGACTATCTGTATGAGCCAGATCCGGGGAGACCTTGGCTGGGACACTGAGAACTTCCCAGTCCCAGGTCTCTCCCTATCTTAGGGGAGGGTAGGAAGACACTATTCTCACGTACTCCCCTAGACTCTTTTGGCGGGCGGATTTGATGGTtggtgtggaagtatgtgtgtcgCTATAAATTGAAGGTCCTGTACTGTACACGTCAGAACGTTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU56784 True 602 lncRNA 0.47 1 46350310 46350911

Neighbor

gene id symbol gene type direction distance location
tcp11l1 tcp11l1 coding downstream 253203 46085582 ~ 46097107 (-)
LOC110523921 LOC106573228 coding downstream 273569 46025778 ~ 46076741 (-)
LOC110523913 LOC106573227 coding downstream 325105 45987946 ~ 46025205 (-)
LOC110523903 LOC106573225 coding downstream 483212 45730235 ~ 45867098 (-)
LOC110523892 LOC106573278 coding downstream 669652 45632171 ~ 45680658 (-)
LOC110524015 LOC106573241 coding upstream 386524 46737435 ~ 46743033 (-)
LOC110524028 LOC106561496 coding upstream 466145 46817056 ~ 46839553 (-)
LOC118964698 NA coding upstream 550410 46901321 ~ 46902393 (-)
LOC118964697 NA coding upstream 595137 46946048 ~ 46947526 (-)
LOC118964694 NA coding upstream 621858 46972769 ~ 46974689 (-)
G50411 NA non-coding downstream 2447 46347647 ~ 46347863 (-)
G50367 NA non-coding downstream 71768 46278307 ~ 46278542 (-)
G50366 NA non-coding downstream 72499 46277576 ~ 46277811 (-)
G50362 NA non-coding downstream 75325 46274773 ~ 46274985 (-)
G50360 NA non-coding downstream 76804 46273266 ~ 46273506 (-)
G50830 NA non-coding upstream 11725 46362636 ~ 46362847 (-)
G50831 NA non-coding upstream 12332 46363243 ~ 46363452 (-)
G50875 NA non-coding upstream 83317 46434228 ~ 46434495 (-)
G50883 NA non-coding upstream 92760 46443671 ~ 46443969 (-)
G50886 NA non-coding upstream 96549 46447460 ~ 46447697 (-)
G49962 NA other downstream 400359 45948958 ~ 45949951 (-)
G49774 NA other downstream 629186 45720805 ~ 45721124 (-)
tspan9a LOC106573177 other downstream 3221281 42852829 ~ 43129052 (-)
G41868 NA other downstream 7328285 39021805 ~ 39022025 (-)
G40768 LOC106573348 other downstream 8158574 38187488 ~ 38191736 (-)
G51214 NA other upstream 713863 47064774 ~ 47236625 (-)
G51285 LOC106561952 other upstream 938028 47288939 ~ 47289681 (-)
G51649 LOC106573246 other upstream 1026730 47377641 ~ 47378543 (-)
LOC110524104 LOC106573248 other upstream 1191465 47541224 ~ 47561223 (-)
LOC110524264 LOC106573263 other upstream 1943197 48291626 ~ 48304829 (-)

Expression


Co-expression Network