Gene
RNA
| Item | Value |
|---|---|
| gene id | G50886 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 46447460 ~ 46447697 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU56849 | True | 238 | lncRNA | 0.39 | 1 | 46447460 | 46447697 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tcp11l1 | tcp11l1 | coding | downstream | 350353 | 46085582 ~ 46097107 (-) |
| LOC110523921 | LOC106573228 | coding | downstream | 370719 | 46025778 ~ 46076741 (-) |
| LOC110523913 | LOC106573227 | coding | downstream | 422255 | 45987946 ~ 46025205 (-) |
| LOC110523903 | LOC106573225 | coding | downstream | 580362 | 45730235 ~ 45867098 (-) |
| LOC110523892 | LOC106573278 | coding | downstream | 766802 | 45632171 ~ 45680658 (-) |
| LOC110524015 | LOC106573241 | coding | upstream | 289738 | 46737435 ~ 46743033 (-) |
| LOC110524028 | LOC106561496 | coding | upstream | 369359 | 46817056 ~ 46839553 (-) |
| LOC118964698 | NA | coding | upstream | 453624 | 46901321 ~ 46902393 (-) |
| LOC118964697 | NA | coding | upstream | 498351 | 46946048 ~ 46947526 (-) |
| LOC118964694 | NA | coding | upstream | 525072 | 46972769 ~ 46974689 (-) |
| G50883 | NA | non-coding | downstream | 3491 | 46443671 ~ 46443969 (-) |
| G50875 | NA | non-coding | downstream | 12965 | 46434228 ~ 46434495 (-) |
| G50831 | NA | non-coding | downstream | 84008 | 46363243 ~ 46363452 (-) |
| G50830 | NA | non-coding | downstream | 84613 | 46362636 ~ 46362847 (-) |
| G50824 | NA | non-coding | downstream | 96549 | 46350310 ~ 46350911 (-) |
| G50926 | NA | non-coding | upstream | 72886 | 46520583 ~ 46614421 (-) |
| G51091 | NA | non-coding | upstream | 316165 | 46763862 ~ 46764073 (-) |
| G51078 | NA | non-coding | upstream | 334069 | 46781766 ~ 46813577 (-) |
| G51038 | NA | non-coding | upstream | 350864 | 46798561 ~ 46805053 (-) |
| G51122 | NA | non-coding | upstream | 366257 | 46813954 ~ 46814375 (-) |
| G49962 | NA | other | downstream | 497509 | 45948958 ~ 45949951 (-) |
| G49774 | NA | other | downstream | 726336 | 45720805 ~ 45721124 (-) |
| tspan9a | LOC106573177 | other | downstream | 3318431 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 7425435 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 8255724 | 38187488 ~ 38191736 (-) |
| G51214 | NA | other | upstream | 617077 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 841242 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 929944 | 47377641 ~ 47378543 (-) |
| LOC110524104 | LOC106573248 | other | upstream | 1094679 | 47541224 ~ 47561223 (-) |
| LOC110524264 | LOC106573263 | other | upstream | 1846411 | 48291626 ~ 48304829 (-) |
