G50490


Basic Information

Item Value
gene id G50490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46460606 ~ 46460816 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56408
tttccacttcacaataacagcatttacagttaaccggggcagctctagcaggcagaaatttgactaactgacttgttgcaaaggtggcatcctatgacggtgccacgttgaaagtcactgagctcttcagtaaggccattctactgccaatgtttgtctatggagattgcatggctgtgtgctcgattttatgcacctgtcagcaaccggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56408 True 211 lncRNA 0.44 1 46460606 46460816

Neighbor

gene id symbol gene type direction distance location
LOC110523948 LOC106573232 coding upstream 193351 46249719 ~ 46267255 (+)
wt-t1a wt-t1a coding upstream 301084 46142006 ~ 46159522 (+)
LOC110523825 LOC106573223 coding upstream 989093 45466496 ~ 45471513 (+)
LOC118964647 NA coding upstream 1005779 45452036 ~ 45454827 (+)
LOC110523812 facr1 coding upstream 1014193 45427670 ~ 45446413 (+)
LOC118962389 dcdc1 coding downstream 8680 46469496 ~ 46477752 (+)
LOC118964304 dcdc5 coding downstream 38194 46499010 ~ 46503478 (+)
LOC110532345 dcdc5 coding downstream 42998 46503814 ~ 46505112 (+)
LOC118964305 NA coding downstream 44432 46505248 ~ 46508046 (+)
LOC118966744 NA coding downstream 51720 46512536 ~ 46512590 (+)
G50483 NA non-coding upstream 7623 46452689 ~ 46452983 (+)
G50478 NA non-coding upstream 12704 46447689 ~ 46447902 (+)
G50474 NA non-coding upstream 19954 46440450 ~ 46440652 (+)
G50472 NA non-coding upstream 25453 46434927 ~ 46435153 (+)
G50455 NA non-coding upstream 52004 46408354 ~ 46408602 (+)
G50495 NA non-coding downstream 3161 46463977 ~ 46464187 (+)
G50496 NA non-coding downstream 3421 46464237 ~ 46464477 (+)
G50497 NA non-coding downstream 4466 46465282 ~ 46465550 (+)
G50601 NA non-coding downstream 194869 46655685 ~ 46668051 (+)
G50633 NA non-coding downstream 297997 46758813 ~ 46759118 (+)
G50010 LOC106573227 other upstream 467715 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 723826 45730241 ~ 45736780 (+)
G49142 NA other upstream 1042426 45414706 ~ 45418180 (+)
G48976 NA other upstream 1313966 45145278 ~ 45146640 (+)
LOC110523657 NA other upstream 1388177 45071354 ~ 45072433 (+)
LOC110524042 NA other downstream 397092 46854230 ~ 46861465 (+)
LOC110520864 NA other downstream 766430 47227246 ~ 47260224 (+)
G52080 NA other downstream 1545858 48006674 ~ 48024958 (+)
G52324 NA other downstream 1919726 48380542 ~ 48383257 (+)
G53181 NA other downstream 2432681 48893497 ~ 48893912 (+)

Expression


Co-expression Network