G50496


Basic Information

Item Value
gene id G50496
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46464237 ~ 46464477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56414
AAAAGGATAACAAGACACCAAACCATTATTACTCCCTTAAGGGAATCTGTGCTCACCTcctaacctcaacccctccttcacctaatccacagGTATCCATCTGTATTCTCTATACCAACACGTTGCTCTCCTCTCGTCAacccaacacattccaaagccttCTGTCTTTCTTCAGAGAACCCTTAACTTCTGACATAAAACCCTTTCTCTTTTACTCCTTTACTCCTATGCTTCTTTCcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56414 True 241 lncRNA 0.42 1 46464237 46464477

Neighbor

gene id symbol gene type direction distance location
LOC110523948 LOC106573232 coding upstream 196982 46249719 ~ 46267255 (+)
wt-t1a wt-t1a coding upstream 304715 46142006 ~ 46159522 (+)
LOC110523825 LOC106573223 coding upstream 992724 45466496 ~ 45471513 (+)
LOC118964647 NA coding upstream 1009410 45452036 ~ 45454827 (+)
LOC110523812 facr1 coding upstream 1017824 45427670 ~ 45446413 (+)
LOC118962389 dcdc1 coding downstream 5019 46469496 ~ 46477752 (+)
LOC118964304 dcdc5 coding downstream 34533 46499010 ~ 46503478 (+)
LOC110532345 dcdc5 coding downstream 39337 46503814 ~ 46505112 (+)
LOC118964305 NA coding downstream 40771 46505248 ~ 46508046 (+)
LOC118966744 NA coding downstream 48059 46512536 ~ 46512590 (+)
G50495 NA non-coding upstream 50 46463977 ~ 46464187 (+)
G50490 NA non-coding upstream 3421 46460606 ~ 46460816 (+)
G50483 NA non-coding upstream 11254 46452689 ~ 46452983 (+)
G50478 NA non-coding upstream 16335 46447689 ~ 46447902 (+)
G50474 NA non-coding upstream 23585 46440450 ~ 46440652 (+)
G50497 NA non-coding downstream 805 46465282 ~ 46465550 (+)
G50601 NA non-coding downstream 191208 46655685 ~ 46668051 (+)
G50633 NA non-coding downstream 294336 46758813 ~ 46759118 (+)
G50642 NA non-coding downstream 308263 46772740 ~ 46773045 (+)
G50645 NA non-coding downstream 313690 46778167 ~ 46778399 (+)
G50010 LOC106573227 other upstream 471346 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 727457 45730241 ~ 45736780 (+)
G49142 NA other upstream 1046057 45414706 ~ 45418180 (+)
G48976 NA other upstream 1317597 45145278 ~ 45146640 (+)
LOC110523657 NA other upstream 1391808 45071354 ~ 45072433 (+)
LOC110524042 NA other downstream 393431 46854230 ~ 46861465 (+)
LOC110520864 NA other downstream 762769 47227246 ~ 47260224 (+)
G52080 NA other downstream 1542197 48006674 ~ 48024958 (+)
G52324 NA other downstream 1916065 48380542 ~ 48383257 (+)
G53181 NA other downstream 2429020 48893497 ~ 48893912 (+)

Expression


Co-expression Network