G50642


Basic Information

Item Value
gene id G50642
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46772740 ~ 46773045 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56571
TttgtaagaagaaaaaaaagtgttccTGTATCCCATTTTCTTGAGTTTCTCGTGTTCAGGTGTGGAAAAGTGAGTTTCCTGCCAGAATAGTATGTCACCGCCCTCCCGTTTCATCTTTGCTATTAACTTACCTCTCTTGATGTCACTCCCCAGTCCGTTTACATCGAGACTTATGACCTTAAATTCCCCCAATTCCCCCGACCTTCTCACCCTTGTTCAGCATTGGGGGAAAATAGGGGATATATTCTACCTATTGTAATGTCAACCGTAACAACCCAAAGTCTTAACAGCGCGCGGTAACTATTC

Function

NR:

description
WD repeat-containing protein 3 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56571 True 306 lncRNA 0.41 1 46772740 46773045

Neighbor

gene id symbol gene type direction distance location
LOC110524008 LOC106573239 coding upstream 35877 46632435 ~ 46736863 (+)
LOC110524001 mppd2 coding upstream 196799 46525358 ~ 46575941 (+)
LOC118966744 NA coding upstream 260150 46512536 ~ 46512590 (+)
LOC118964305 NA coding upstream 264694 46505248 ~ 46508046 (+)
LOC110532345 dcdc5 coding upstream 267628 46503814 ~ 46505112 (+)
LOC110524021 LOC106573242 coding downstream 25441 46798486 ~ 46810016 (+)
LOC110524042 NA coding downstream 81185 46854230 ~ 46861465 (+)
LOC110524064 NA coding downstream 470812 47243857 ~ 47246448 (+)
LOC110520864 NA coding downstream 483548 47227246 ~ 47260224 (+)
lamb4 lamb4 coding downstream 543253 47316298 ~ 47339999 (+)
G50633 NA non-coding upstream 13622 46758813 ~ 46759118 (+)
G50601 NA non-coding upstream 104689 46655685 ~ 46668051 (+)
G50497 NA non-coding upstream 307190 46465282 ~ 46465550 (+)
G50496 NA non-coding upstream 308263 46464237 ~ 46464477 (+)
G50495 NA non-coding upstream 308553 46463977 ~ 46464187 (+)
G50645 NA non-coding downstream 5122 46778167 ~ 46778399 (+)
G50661 NA non-coding downstream 34301 46807346 ~ 46809439 (+)
G50672 NA non-coding downstream 64741 46837786 ~ 46838432 (+)
G50701 NA non-coding downstream 100043 46873088 ~ 46886791 (+)
G50702 NA non-coding downstream 101155 46874200 ~ 46921807 (+)
G50010 LOC106573227 other upstream 779849 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 1035960 45730241 ~ 45736780 (+)
G49142 NA other upstream 1354560 45414706 ~ 45418180 (+)
G48976 NA other upstream 1626100 45145278 ~ 45146640 (+)
LOC110523657 NA other upstream 1700311 45071354 ~ 45072433 (+)
G52080 NA other downstream 1233629 48006674 ~ 48024958 (+)
G52324 NA other downstream 1607497 48380542 ~ 48383257 (+)
G53181 NA other downstream 2120452 48893497 ~ 48893912 (+)

Expression


Co-expression Network