G50645


Basic Information

Item Value
gene id G50645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46778167 ~ 46778399 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56574
CCTTAATCTCTATTGGATGTTGTAATATTTTGGGACATACTCCATCACAAAGTAAAATCTGGACTGAATAGGGTCACACCTAGGAACCAGATCCTTCAACTGATCTGACTAAATCTGCACTTTGAGGTGGATTGGTCCCTAATTTCAATATAACATGAGAGAGACCACAAATGAACCGTACTTCTTTGCCTCCTGTTTGTGTTTTTTATTTACCCACTGAACATCTAACAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56574 True 233 lncRNA 0.39 1 46778167 46778399

Neighbor

gene id symbol gene type direction distance location
LOC110524008 LOC106573239 coding upstream 41304 46632435 ~ 46736863 (+)
LOC110524001 mppd2 coding upstream 202226 46525358 ~ 46575941 (+)
LOC118966744 NA coding upstream 265577 46512536 ~ 46512590 (+)
LOC118964305 NA coding upstream 270121 46505248 ~ 46508046 (+)
LOC110532345 dcdc5 coding upstream 273055 46503814 ~ 46505112 (+)
LOC110524021 LOC106573242 coding downstream 20087 46798486 ~ 46810016 (+)
LOC110524042 NA coding downstream 75831 46854230 ~ 46861465 (+)
LOC110524064 NA coding downstream 465458 47243857 ~ 47246448 (+)
LOC110520864 NA coding downstream 478194 47227246 ~ 47260224 (+)
lamb4 lamb4 coding downstream 537899 47316298 ~ 47339999 (+)
G50642 NA non-coding upstream 5122 46772740 ~ 46773045 (+)
G50633 NA non-coding upstream 19049 46758813 ~ 46759118 (+)
G50601 NA non-coding upstream 110116 46655685 ~ 46668051 (+)
G50497 NA non-coding upstream 312617 46465282 ~ 46465550 (+)
G50496 NA non-coding upstream 313690 46464237 ~ 46464477 (+)
G50661 NA non-coding downstream 28947 46807346 ~ 46809439 (+)
G50672 NA non-coding downstream 59387 46837786 ~ 46838432 (+)
G50701 NA non-coding downstream 94689 46873088 ~ 46886791 (+)
G50702 NA non-coding downstream 95801 46874200 ~ 46921807 (+)
G50674 LOC106573279 non-coding downstream 155090 46933489 ~ 47188884 (+)
G50010 LOC106573227 other upstream 785276 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 1041387 45730241 ~ 45736780 (+)
G49142 NA other upstream 1359987 45414706 ~ 45418180 (+)
G48976 NA other upstream 1631527 45145278 ~ 45146640 (+)
LOC110523657 NA other upstream 1705738 45071354 ~ 45072433 (+)
G52080 NA other downstream 1228275 48006674 ~ 48024958 (+)
G52324 NA other downstream 1602143 48380542 ~ 48383257 (+)
G53181 NA other downstream 2115098 48893497 ~ 48893912 (+)

Expression


Co-expression Network