Gene
RNA
| Item | Value |
|---|---|
| gene id | G51078 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 46781766 ~ 46813577 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107745958 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU57070 | True | 1294 | lncRNA | 0.47 | 2 | 46781766 | 46813577 |
46,748,000
46,752,000
46,756,000
46,760,000
46,764,000
46,768,000
46,772,000
46,776,000
46,780,000
46,784,000
46,788,000
46,792,000
46,796,000
46,800,000
46,804,000
46,808,000
46,812,000
46,816,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524015 | LOC106573241 | coding | downstream | 38733 | 46737435 ~ 46743033 (-) |
| tcp11l1 | tcp11l1 | coding | downstream | 684659 | 46085582 ~ 46097107 (-) |
| LOC110523921 | LOC106573228 | coding | downstream | 705025 | 46025778 ~ 46076741 (-) |
| LOC110523913 | LOC106573227 | coding | downstream | 756561 | 45987946 ~ 46025205 (-) |
| LOC110523903 | LOC106573225 | coding | downstream | 914668 | 45730235 ~ 45867098 (-) |
| LOC110524028 | LOC106561496 | coding | upstream | 3479 | 46817056 ~ 46839553 (-) |
| LOC118964698 | NA | coding | upstream | 87744 | 46901321 ~ 46902393 (-) |
| LOC118964697 | NA | coding | upstream | 132471 | 46946048 ~ 46947526 (-) |
| LOC118964694 | NA | coding | upstream | 159192 | 46972769 ~ 46974689 (-) |
| LOC118964693 | NA | coding | upstream | 223842 | 47037419 ~ 47038580 (-) |
| G51091 | NA | non-coding | downstream | 17693 | 46763862 ~ 46764073 (-) |
| G50926 | NA | non-coding | downstream | 167345 | 46520583 ~ 46614421 (-) |
| G50886 | NA | non-coding | downstream | 334069 | 46447460 ~ 46447697 (-) |
| G50883 | NA | non-coding | downstream | 337797 | 46443671 ~ 46443969 (-) |
| G50875 | NA | non-coding | downstream | 347271 | 46434228 ~ 46434495 (-) |
| G51122 | NA | non-coding | upstream | 377 | 46813954 ~ 46814375 (-) |
| G51123 | NA | non-coding | upstream | 1017 | 46814594 ~ 46814825 (-) |
| G51149 | NA | non-coding | upstream | 40250 | 46853827 ~ 46857698 (-) |
| G51160 | NA | non-coding | upstream | 86587 | 46900164 ~ 46911959 (-) |
| G49962 | NA | other | downstream | 831815 | 45948958 ~ 45949951 (-) |
| G49774 | NA | other | downstream | 1060642 | 45720805 ~ 45721124 (-) |
| tspan9a | LOC106573177 | other | downstream | 3652737 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 7759741 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 8590030 | 38187488 ~ 38191736 (-) |
| G51214 | NA | other | upstream | 251197 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 475362 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 564064 | 47377641 ~ 47378543 (-) |
| LOC110524104 | LOC106573248 | other | upstream | 728799 | 47541224 ~ 47561223 (-) |
| LOC110524264 | LOC106573263 | other | upstream | 1480531 | 48291626 ~ 48304829 (-) |
