G50661


Basic Information

Item Value
gene id G50661
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46807346 ~ 46809439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56590
TAAACAACGATGGTAAAATTGTCACGCAAGCAATTAATCAAGGTGAATGGTTTTATGAACTGATATACAAAACTTAGATTTAAGCTGTTATATCAAATATCTCACTACAAAAGAATGCTCAGTATATGGGGCATTGAAAAGTCAGACCGGTGCAGGCTGCCACAAGGAAACCGACTCAATAGAGCATCTCTTTTGGTTCTCTCCATCTGTGGCTTGATTTTGGAGCATTTTCGGTAGAAATGTTGCAGATGGGGAGGTTCAACTCCCTAGTGAGACACCATGGTAGATTGGCGGTATGTATTGCCAGAGGAAATGGTACAATAATGATTTACCGGGAGAGATGGGTTGATCTGTGGCTGTTTGAAGGTTGGAATAGATACATACACACTTGCACATTTTTATAAAGGTTTGAGATCCTTCAATCAGGGGTGAGTGTGGGGCTGTGATTGTATGTTTTGTGTTtagcactgtatgttttttgGTTTCACGCTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56590 True 494 lncRNA 0.40 2 46807346 46809439

Neighbor

gene id symbol gene type direction distance location
LOC110524008 LOC106573239 coding upstream 70483 46632435 ~ 46736863 (+)
LOC110524001 mppd2 coding upstream 231405 46525358 ~ 46575941 (+)
LOC118966744 NA coding upstream 294756 46512536 ~ 46512590 (+)
LOC118964305 NA coding upstream 299300 46505248 ~ 46508046 (+)
LOC110532345 dcdc5 coding upstream 302234 46503814 ~ 46505112 (+)
LOC110524042 NA coding downstream 44791 46854230 ~ 46861465 (+)
LOC110524064 NA coding downstream 434418 47243857 ~ 47246448 (+)
LOC110520864 NA coding downstream 447154 47227246 ~ 47260224 (+)
lamb4 lamb4 coding downstream 506859 47316298 ~ 47339999 (+)
LOC110524092 LOC106573246 coding downstream 530727 47340166 ~ 47381610 (+)
G50645 NA non-coding upstream 28947 46778167 ~ 46778399 (+)
G50642 NA non-coding upstream 34301 46772740 ~ 46773045 (+)
G50633 NA non-coding upstream 48228 46758813 ~ 46759118 (+)
G50601 NA non-coding upstream 139295 46655685 ~ 46668051 (+)
G50497 NA non-coding upstream 341796 46465282 ~ 46465550 (+)
G50672 NA non-coding downstream 28347 46837786 ~ 46838432 (+)
G50701 NA non-coding downstream 63649 46873088 ~ 46886791 (+)
G50702 NA non-coding downstream 64761 46874200 ~ 46921807 (+)
G50674 LOC106573279 non-coding downstream 124050 46933489 ~ 47188884 (+)
G50728 NA non-coding downstream 167935 46977374 ~ 46982374 (+)
G50010 LOC106573227 other upstream 814455 45992273 ~ 45992891 (+)
G49335 LOC106573225 other upstream 1070566 45730241 ~ 45736780 (+)
G49142 NA other upstream 1389166 45414706 ~ 45418180 (+)
G48976 NA other upstream 1660706 45145278 ~ 45146640 (+)
LOC110523657 NA other upstream 1734917 45071354 ~ 45072433 (+)
G52080 NA other downstream 1197235 48006674 ~ 48024958 (+)
G52324 NA other downstream 1571103 48380542 ~ 48383257 (+)
G53181 NA other downstream 2084058 48893497 ~ 48893912 (+)

Expression


Co-expression Network